Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3082 and Dsui_3083 are separated by 140 nucleotides Dsui_3083 and Dsui_3084 are separated by 98 nucleotides
Dsui_3082: Dsui_3082 - chaperone protein DnaJ, at 3,299,528 to 3,300,667
_3082
Dsui_3083: Dsui_3083 - ABC-type branched-chain amino acid transport system, periplasmic component, at 3,300,808 to 3,301,953
_3083
Dsui_3084: Dsui_3084 - cysteinyl-tRNA synthetase, at 3,302,052 to 3,303,482
_3084
Position (kb)
3300
3301
3302 Strain fitness (log2 ratio)
-1
0
1
2 at 3300.492 kb on + strand, within Dsui_3082 at 3300.580 kb on + strand at 3300.633 kb on + strand at 3300.757 kb on - strand at 3300.780 kb on + strand at 3300.859 kb on + strand at 3300.936 kb on - strand, within Dsui_3083 at 3300.994 kb on - strand at 3301.128 kb on - strand, within Dsui_3083 at 3301.188 kb on - strand, within Dsui_3083 at 3301.328 kb on + strand, within Dsui_3083 at 3301.328 kb on + strand, within Dsui_3083 at 3301.444 kb on - strand, within Dsui_3083 at 3301.451 kb on + strand, within Dsui_3083 at 3301.454 kb on - strand, within Dsui_3083 at 3301.481 kb on - strand, within Dsui_3083 at 3301.493 kb on - strand, within Dsui_3083 at 3301.502 kb on + strand, within Dsui_3083 at 3301.557 kb on + strand, within Dsui_3083 at 3301.606 kb on + strand, within Dsui_3083 at 3301.644 kb on + strand, within Dsui_3083 at 3301.645 kb on + strand, within Dsui_3083 at 3301.675 kb on - strand, within Dsui_3083 at 3301.740 kb on - strand, within Dsui_3083 at 3301.749 kb on + strand, within Dsui_3083 at 3301.830 kb on + strand, within Dsui_3083 at 3301.855 kb on - strand at 3301.855 kb on - strand at 3301.878 kb on + strand at 3301.942 kb on + strand at 3301.947 kb on + strand at 3302.052 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 3,300,492 + Dsui_3082 0.85 -0.0 3,300,580 + -0.6 3,300,633 + +0.2 3,300,757 - +0.6 3,300,780 + +0.5 3,300,859 + +1.0 3,300,936 - Dsui_3083 0.11 +0.5 3,300,994 - -0.3 3,301,128 - Dsui_3083 0.28 +1.0 3,301,188 - Dsui_3083 0.33 +1.4 3,301,328 + Dsui_3083 0.45 +0.5 3,301,328 + Dsui_3083 0.45 +0.5 3,301,444 - Dsui_3083 0.55 +1.3 3,301,451 + Dsui_3083 0.56 +0.9 3,301,454 - Dsui_3083 0.56 +0.0 3,301,481 - Dsui_3083 0.59 -0.1 3,301,493 - Dsui_3083 0.60 +0.4 3,301,502 + Dsui_3083 0.61 +0.8 3,301,557 + Dsui_3083 0.65 +0.3 3,301,606 + Dsui_3083 0.70 +1.8 3,301,644 + Dsui_3083 0.73 +1.1 3,301,645 + Dsui_3083 0.73 +0.4 3,301,675 - Dsui_3083 0.76 +0.3 3,301,740 - Dsui_3083 0.81 +0.7 3,301,749 + Dsui_3083 0.82 +1.0 3,301,830 + Dsui_3083 0.89 -0.1 3,301,855 - -0.2 3,301,855 - +0.6 3,301,878 + +0.4 3,301,942 + +1.0 3,301,947 + -0.8 3,302,052 - +0.7
Or see this region's nucleotide sequence