Strain Fitness in Dechlorosoma suillum PS around Dsui_3074

Experiment: Anaero. lactate (C), chlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3073 and Dsui_3074 are separated by 128 nucleotidesDsui_3074 and Dsui_3075 overlap by 1 nucleotides Dsui_3073: Dsui_3073 - putative sugar kinase, at 3,288,729 to 3,289,607 _3073 Dsui_3074: Dsui_3074 - heat shock gene repressor HrcA, at 3,289,736 to 3,290,764 _3074 Dsui_3075: Dsui_3075 - ferrochelatase, at 3,290,764 to 3,291,867 _3075 Position (kb) 3289 3290 3291Strain fitness (log2 ratio) -2 -1 0 1at 3289.636 kb on - strandat 3289.762 kb on + strandat 3289.783 kb on + strandat 3289.907 kb on + strand, within Dsui_3074at 3289.907 kb on + strand, within Dsui_3074at 3289.937 kb on + strand, within Dsui_3074at 3290.023 kb on + strand, within Dsui_3074at 3290.058 kb on + strand, within Dsui_3074at 3290.159 kb on + strand, within Dsui_3074at 3290.195 kb on - strandat 3290.278 kb on + strand, within Dsui_3074at 3290.375 kb on - strand, within Dsui_3074at 3290.411 kb on + strand, within Dsui_3074at 3290.414 kb on - strand, within Dsui_3074at 3290.489 kb on + strand, within Dsui_3074at 3290.497 kb on - strand, within Dsui_3074at 3290.507 kb on - strand, within Dsui_3074at 3290.563 kb on + strand, within Dsui_3074at 3290.640 kb on + strand, within Dsui_3074at 3290.684 kb on + strandat 3290.684 kb on + strandat 3290.721 kb on - strandat 3290.726 kb on - strandat 3290.728 kb on + strandat 3290.728 kb on + strandat 3290.741 kb on - strandat 3290.753 kb on + strandat 3290.753 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor
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3,289,636 - +1.7
3,289,762 + -0.8
3,289,783 + +0.1
3,289,907 + Dsui_3074 0.17 -0.2
3,289,907 + Dsui_3074 0.17 -1.8
3,289,937 + Dsui_3074 0.20 -1.1
3,290,023 + Dsui_3074 0.28 -2.6
3,290,058 + Dsui_3074 0.31 -1.2
3,290,159 + Dsui_3074 0.41 -0.6
3,290,195 - -1.0
3,290,278 + Dsui_3074 0.53 +0.1
3,290,375 - Dsui_3074 0.62 -2.0
3,290,411 + Dsui_3074 0.66 -0.3
3,290,414 - Dsui_3074 0.66 -0.9
3,290,489 + Dsui_3074 0.73 +0.3
3,290,497 - Dsui_3074 0.74 -2.4
3,290,507 - Dsui_3074 0.75 -0.1
3,290,563 + Dsui_3074 0.80 +0.3
3,290,640 + Dsui_3074 0.88 -0.1
3,290,684 + +0.1
3,290,684 + -0.2
3,290,721 - -1.4
3,290,726 - +1.3
3,290,728 + -1.3
3,290,728 + +0.0
3,290,741 - -2.0
3,290,753 + +0.4
3,290,753 + -1.1

Or see this region's nucleotide sequence