Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2932 and Dsui_2933 are separated by 10 nucleotides Dsui_2933 and Dsui_2934 are separated by 63 nucleotides Dsui_2934 and Dsui_2935 are separated by 239 nucleotides
Dsui_2932: Dsui_2932 - membrane-fusion protein, at 3,135,220 to 3,136,389
_2932
Dsui_2933: Dsui_2933 - heavy metal efflux pump, cobalt-zinc-cadmium, at 3,136,400 to 3,139,513
_2933
Dsui_2934: Dsui_2934 - hypothetical protein, at 3,139,577 to 3,139,960
_2934
Dsui_2935: Dsui_2935 - NAD/NADP transhydrogenase alpha subunit, at 3,140,200 to 3,141,327
_2935
Position (kb)
3136
3137
3138
3139
3140 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3135.467 kb on + strand at 3135.475 kb on - strand at 3135.475 kb on - strand at 3135.539 kb on + strand at 3135.575 kb on + strand at 3135.577 kb on - strand at 3135.620 kb on + strand at 3135.620 kb on + strand, within Dsui_2932 at 3135.674 kb on - strand at 3135.720 kb on + strand at 3135.733 kb on - strand, within Dsui_2932 at 3135.924 kb on - strand at 3135.946 kb on + strand at 3135.963 kb on - strand at 3136.123 kb on + strand, within Dsui_2932 at 3136.264 kb on - strand at 3136.264 kb on - strand at 3136.402 kb on + strand at 3136.505 kb on + strand at 3136.596 kb on - strand at 3136.613 kb on + strand at 3136.708 kb on + strand at 3136.758 kb on - strand at 3136.849 kb on + strand, within Dsui_2933 at 3136.849 kb on + strand, within Dsui_2933 at 3137.032 kb on - strand at 3137.155 kb on + strand at 3137.225 kb on + strand at 3137.288 kb on + strand, within Dsui_2933 at 3137.301 kb on + strand at 3137.382 kb on + strand at 3137.419 kb on + strand at 3137.429 kb on + strand at 3137.565 kb on + strand at 3137.829 kb on - strand at 3138.050 kb on + strand at 3138.118 kb on + strand, within Dsui_2933 at 3138.362 kb on - strand at 3138.474 kb on - strand at 3138.498 kb on + strand at 3138.592 kb on + strand at 3138.761 kb on + strand, within Dsui_2933 at 3138.798 kb on + strand at 3138.806 kb on - strand at 3138.868 kb on - strand, within Dsui_2933 at 3138.897 kb on - strand, within Dsui_2933 at 3138.909 kb on + strand at 3138.963 kb on + strand, within Dsui_2933 at 3139.007 kb on + strand, within Dsui_2933 at 3139.066 kb on + strand at 3139.124 kb on + strand at 3139.203 kb on - strand at 3139.324 kb on - strand at 3139.420 kb on + strand at 3139.420 kb on + strand at 3139.557 kb on - strand at 3139.749 kb on + strand, within Dsui_2934 at 3139.757 kb on - strand, within Dsui_2934 at 3139.944 kb on + strand at 3139.963 kb on - strand at 3140.115 kb on + strand at 3140.115 kb on + strand at 3140.196 kb on - strand at 3140.205 kb on + strand at 3140.310 kb on + strand at 3140.317 kb on + strand, within Dsui_2935 at 3140.427 kb on + strand, within Dsui_2935 at 3140.462 kb on + strand, within Dsui_2935 at 3140.467 kb on + strand at 3140.481 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 3,135,467 + +1.3 3,135,475 - +1.3 3,135,475 - -0.3 3,135,539 + +1.3 3,135,575 + +0.3 3,135,577 - +0.3 3,135,620 + +1.3 3,135,620 + Dsui_2932 0.34 -0.3 3,135,674 - +1.3 3,135,720 + +1.3 3,135,733 - Dsui_2932 0.44 +1.3 3,135,924 - +1.3 3,135,946 + +0.3 3,135,963 - +0.9 3,136,123 + Dsui_2932 0.77 -0.1 3,136,264 - +0.3 3,136,264 - +1.3 3,136,402 + -0.2 3,136,505 + -0.8 3,136,596 - +1.3 3,136,613 + -0.1 3,136,708 + -0.7 3,136,758 - +1.3 3,136,849 + Dsui_2933 0.14 +0.3 3,136,849 + Dsui_2933 0.14 -1.0 3,137,032 - -0.3 3,137,155 + -0.7 3,137,225 + +1.3 3,137,288 + Dsui_2933 0.29 -0.3 3,137,301 + +1.3 3,137,382 + -0.3 3,137,419 + -1.0 3,137,429 + +2.3 3,137,565 + -0.3 3,137,829 - +0.0 3,138,050 + +0.3 3,138,118 + Dsui_2933 0.55 -0.4 3,138,362 - -0.3 3,138,474 - +0.3 3,138,498 + +0.3 3,138,592 + -1.0 3,138,761 + Dsui_2933 0.76 -1.8 3,138,798 + +0.6 3,138,806 - +0.3 3,138,868 - Dsui_2933 0.79 -1.3 3,138,897 - Dsui_2933 0.80 -1.0 3,138,909 + +0.3 3,138,963 + Dsui_2933 0.82 -0.4 3,139,007 + Dsui_2933 0.84 +0.6 3,139,066 + +0.3 3,139,124 + -0.3 3,139,203 - +0.3 3,139,324 - -0.7 3,139,420 + +0.6 3,139,420 + -1.2 3,139,557 - -0.7 3,139,749 + Dsui_2934 0.45 -0.2 3,139,757 - Dsui_2934 0.47 +1.1 3,139,944 + -0.2 3,139,963 - -1.2 3,140,115 + -0.2 3,140,115 + +0.3 3,140,196 - +0.8 3,140,205 + +0.3 3,140,310 + +0.3 3,140,317 + Dsui_2935 0.10 -0.7 3,140,427 + Dsui_2935 0.20 -0.7 3,140,462 + Dsui_2935 0.23 -2.1 3,140,467 + +0.3 3,140,481 + -0.2
Or see this region's nucleotide sequence