Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2437 and Dsui_2438 overlap by 17 nucleotides Dsui_2438 and Dsui_2439 overlap by 22 nucleotides Dsui_2439 and Dsui_2440 are separated by 6 nucleotides
Dsui_2437: Dsui_2437 - pseudouridine synthase, RluA family, at 2,599,184 to 2,600,179
_2437
Dsui_2438: Dsui_2438 - haloacid dehalogenase superfamily enzyme, subfamily IA, at 2,600,163 to 2,600,819
_2438
Dsui_2439: Dsui_2439 - ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase, at 2,600,798 to 2,601,148
_2439
Dsui_2440: Dsui_2440 - ClpP class periplasmic serine protease, at 2,601,155 to 2,602,141
_2440
Position (kb)
2600
2601
2602 Strain fitness (log2 ratio)
-2
-1
0
1 at 2599.959 kb on + strand, within Dsui_2437 at 2600.021 kb on + strand, within Dsui_2437 at 2600.031 kb on - strand at 2600.046 kb on + strand, within Dsui_2437 at 2600.069 kb on + strand, within Dsui_2437 at 2600.099 kb on - strand at 2600.108 kb on + strand at 2600.114 kb on + strand at 2600.114 kb on + strand at 2600.210 kb on + strand at 2600.308 kb on + strand, within Dsui_2438 at 2600.523 kb on + strand, within Dsui_2438 at 2600.523 kb on + strand, within Dsui_2438 at 2600.649 kb on + strand, within Dsui_2438 at 2600.692 kb on + strand, within Dsui_2438 at 2600.847 kb on - strand at 2600.919 kb on + strand, within Dsui_2439 at 2600.924 kb on + strand, within Dsui_2439 at 2600.997 kb on + strand, within Dsui_2439 at 2601.006 kb on - strand, within Dsui_2439 at 2601.010 kb on - strand at 2601.161 kb on + strand at 2601.212 kb on + strand at 2601.299 kb on - strand, within Dsui_2440 at 2601.326 kb on + strand, within Dsui_2440 at 2601.427 kb on + strand, within Dsui_2440 at 2601.435 kb on - strand, within Dsui_2440 at 2601.464 kb on + strand, within Dsui_2440 at 2601.489 kb on + strand, within Dsui_2440 at 2601.499 kb on + strand, within Dsui_2440 at 2601.595 kb on + strand, within Dsui_2440 at 2601.735 kb on + strand, within Dsui_2440 at 2601.735 kb on + strand, within Dsui_2440 at 2601.746 kb on + strand, within Dsui_2440 at 2601.861 kb on + strand, within Dsui_2440 at 2601.928 kb on + strand, within Dsui_2440 at 2601.929 kb on + strand, within Dsui_2440 at 2601.936 kb on - strand, within Dsui_2440 at 2602.002 kb on - strand, within Dsui_2440 at 2602.109 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 2,599,959 + Dsui_2437 0.78 -0.0 2,600,021 + Dsui_2437 0.84 -0.6 2,600,031 - +1.6 2,600,046 + Dsui_2437 0.87 -0.8 2,600,069 + Dsui_2437 0.89 -0.4 2,600,099 - +0.2 2,600,108 + -1.5 2,600,114 + +0.1 2,600,114 + -0.1 2,600,210 + +0.4 2,600,308 + Dsui_2438 0.22 +0.1 2,600,523 + Dsui_2438 0.55 +0.3 2,600,523 + Dsui_2438 0.55 +0.4 2,600,649 + Dsui_2438 0.74 +0.7 2,600,692 + Dsui_2438 0.81 +0.1 2,600,847 - -0.8 2,600,919 + Dsui_2439 0.34 +0.2 2,600,924 + Dsui_2439 0.36 +0.6 2,600,997 + Dsui_2439 0.57 +0.2 2,601,006 - Dsui_2439 0.59 +0.3 2,601,010 - +1.0 2,601,161 + +0.5 2,601,212 + -2.0 2,601,299 - Dsui_2440 0.15 -1.0 2,601,326 + Dsui_2440 0.17 +1.2 2,601,427 + Dsui_2440 0.28 +0.0 2,601,435 - Dsui_2440 0.28 -0.4 2,601,464 + Dsui_2440 0.31 +0.1 2,601,489 + Dsui_2440 0.34 +0.1 2,601,499 + Dsui_2440 0.35 -0.3 2,601,595 + Dsui_2440 0.45 -0.1 2,601,735 + Dsui_2440 0.59 +0.9 2,601,735 + Dsui_2440 0.59 -0.1 2,601,746 + Dsui_2440 0.60 +0.3 2,601,861 + Dsui_2440 0.72 -1.2 2,601,928 + Dsui_2440 0.78 -0.1 2,601,929 + Dsui_2440 0.78 -0.5 2,601,936 - Dsui_2440 0.79 -2.4 2,602,002 - Dsui_2440 0.86 +0.1 2,602,109 - -0.5
Or see this region's nucleotide sequence