Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1760 and Dsui_1761 are separated by 53 nucleotides Dsui_1761 and Dsui_1762 are separated by 42 nucleotides Dsui_1762 and Dsui_1763 are separated by 73 nucleotides
Dsui_1760: Dsui_1760 - putative O-linked N-acetylglucosamine transferase, SPINDLY family, at 1,847,395 to 1,849,272
_1760
Dsui_1761: Dsui_1761 - methylase involved in ubiquinone/menaquinone biosynthesis, at 1,849,326 to 1,850,357
_1761
Dsui_1762: Dsui_1762 - methylase involved in ubiquinone/menaquinone biosynthesis, at 1,850,400 to 1,850,894
_1762
Dsui_1763: Dsui_1763 - subfamily IIIC HAD-superfamily phosphatase, at 1,850,968 to 1,852,668
_1763
Position (kb)
1849
1850
1851 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1848.488 kb on + strand, within Dsui_1760 at 1848.491 kb on - strand, within Dsui_1760 at 1848.516 kb on + strand, within Dsui_1760 at 1848.519 kb on - strand, within Dsui_1760 at 1848.706 kb on - strand, within Dsui_1760 at 1848.706 kb on - strand, within Dsui_1760 at 1848.766 kb on - strand, within Dsui_1760 at 1848.839 kb on + strand, within Dsui_1760 at 1848.875 kb on - strand, within Dsui_1760 at 1849.092 kb on - strand at 1849.092 kb on - strand at 1849.219 kb on - strand at 1849.252 kb on - strand at 1849.258 kb on - strand at 1849.268 kb on + strand at 1849.268 kb on - strand at 1849.268 kb on - strand at 1849.316 kb on + strand at 1849.316 kb on + strand at 1849.319 kb on - strand at 1849.324 kb on - strand at 1849.324 kb on - strand at 1849.326 kb on + strand at 1849.366 kb on - strand at 1849.370 kb on + strand at 1849.378 kb on + strand at 1849.378 kb on - strand at 1849.540 kb on - strand, within Dsui_1761 at 1849.563 kb on + strand, within Dsui_1761 at 1849.570 kb on - strand, within Dsui_1761 at 1849.650 kb on + strand, within Dsui_1761 at 1849.664 kb on + strand, within Dsui_1761 at 1849.672 kb on - strand, within Dsui_1761 at 1849.765 kb on + strand, within Dsui_1761 at 1849.789 kb on + strand, within Dsui_1761 at 1849.789 kb on + strand, within Dsui_1761 at 1849.873 kb on - strand, within Dsui_1761 at 1849.877 kb on + strand, within Dsui_1761 at 1850.052 kb on - strand, within Dsui_1761 at 1850.052 kb on - strand, within Dsui_1761 at 1850.052 kb on - strand, within Dsui_1761 at 1850.082 kb on - strand, within Dsui_1761 at 1850.090 kb on + strand, within Dsui_1761 at 1850.094 kb on - strand, within Dsui_1761 at 1850.118 kb on - strand, within Dsui_1761 at 1850.216 kb on - strand, within Dsui_1761 at 1850.314 kb on - strand at 1850.319 kb on - strand at 1850.410 kb on + strand at 1850.415 kb on + strand at 1850.436 kb on + strand at 1850.465 kb on + strand, within Dsui_1762 at 1850.522 kb on - strand, within Dsui_1762 at 1850.530 kb on - strand, within Dsui_1762 at 1850.536 kb on - strand, within Dsui_1762 at 1850.592 kb on - strand, within Dsui_1762 at 1850.595 kb on + strand, within Dsui_1762 at 1850.618 kb on + strand, within Dsui_1762 at 1850.651 kb on - strand, within Dsui_1762 at 1850.701 kb on + strand, within Dsui_1762 at 1850.756 kb on + strand, within Dsui_1762 at 1850.757 kb on + strand, within Dsui_1762 at 1850.758 kb on + strand, within Dsui_1762 at 1850.758 kb on + strand, within Dsui_1762 at 1850.764 kb on - strand at 1850.766 kb on - strand, within Dsui_1762 at 1850.781 kb on + strand, within Dsui_1762 at 1850.815 kb on - strand, within Dsui_1762 at 1851.000 kb on + strand at 1851.151 kb on + strand, within Dsui_1763 at 1851.276 kb on + strand, within Dsui_1763 at 1851.285 kb on - strand, within Dsui_1763 at 1851.312 kb on - strand, within Dsui_1763 at 1851.326 kb on + strand, within Dsui_1763
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 1,848,488 + Dsui_1760 0.58 -0.8 1,848,491 - Dsui_1760 0.58 -0.3 1,848,516 + Dsui_1760 0.60 -0.9 1,848,519 - Dsui_1760 0.60 +0.2 1,848,706 - Dsui_1760 0.70 -0.4 1,848,706 - Dsui_1760 0.70 -1.1 1,848,766 - Dsui_1760 0.73 -2.1 1,848,839 + Dsui_1760 0.77 -0.9 1,848,875 - Dsui_1760 0.79 +0.6 1,849,092 - -1.4 1,849,092 - -0.5 1,849,219 - -1.0 1,849,252 - +1.0 1,849,258 - +0.5 1,849,268 + +0.4 1,849,268 - +0.0 1,849,268 - -0.9 1,849,316 + -0.0 1,849,316 + +0.4 1,849,319 - +1.5 1,849,324 - +0.1 1,849,324 - -1.0 1,849,326 + +0.3 1,849,366 - +1.0 1,849,370 + +0.2 1,849,378 + +0.2 1,849,378 - +0.2 1,849,540 - Dsui_1761 0.21 +0.9 1,849,563 + Dsui_1761 0.23 +0.3 1,849,570 - Dsui_1761 0.24 -1.9 1,849,650 + Dsui_1761 0.31 +0.2 1,849,664 + Dsui_1761 0.33 +0.5 1,849,672 - Dsui_1761 0.34 +0.7 1,849,765 + Dsui_1761 0.43 +0.3 1,849,789 + Dsui_1761 0.45 +0.5 1,849,789 + Dsui_1761 0.45 +0.2 1,849,873 - Dsui_1761 0.53 +1.9 1,849,877 + Dsui_1761 0.53 +0.3 1,850,052 - Dsui_1761 0.70 +0.1 1,850,052 - Dsui_1761 0.70 +2.0 1,850,052 - Dsui_1761 0.70 +0.5 1,850,082 - Dsui_1761 0.73 -0.3 1,850,090 + Dsui_1761 0.74 -0.6 1,850,094 - Dsui_1761 0.74 -0.9 1,850,118 - Dsui_1761 0.77 +0.2 1,850,216 - Dsui_1761 0.86 -2.0 1,850,314 - +0.2 1,850,319 - +0.7 1,850,410 + +0.2 1,850,415 + +0.5 1,850,436 + +0.1 1,850,465 + Dsui_1762 0.13 +0.2 1,850,522 - Dsui_1762 0.25 -0.2 1,850,530 - Dsui_1762 0.26 -0.7 1,850,536 - Dsui_1762 0.27 -0.3 1,850,592 - Dsui_1762 0.39 -0.4 1,850,595 + Dsui_1762 0.39 +0.3 1,850,618 + Dsui_1762 0.44 -0.0 1,850,651 - Dsui_1762 0.51 +0.7 1,850,701 + Dsui_1762 0.61 +0.2 1,850,756 + Dsui_1762 0.72 +0.2 1,850,757 + Dsui_1762 0.72 +0.1 1,850,758 + Dsui_1762 0.72 +0.2 1,850,758 + Dsui_1762 0.72 +0.5 1,850,764 - +0.7 1,850,766 - Dsui_1762 0.74 -1.2 1,850,781 + Dsui_1762 0.77 -0.1 1,850,815 - Dsui_1762 0.84 -0.1 1,851,000 + +0.4 1,851,151 + Dsui_1763 0.11 +0.2 1,851,276 + Dsui_1763 0.18 +0.1 1,851,285 - Dsui_1763 0.19 +0.4 1,851,312 - Dsui_1763 0.20 +0.4 1,851,326 + Dsui_1763 0.21 +0.2
Or see this region's nucleotide sequence