Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1630 and Dsui_1631 are separated by 139 nucleotides Dsui_1631 and Dsui_1632 are separated by 18 nucleotides Dsui_1632 and Dsui_1633 are separated by 17 nucleotides Dsui_1633 and Dsui_1634 are separated by 69 nucleotides
Dsui_1630: Dsui_1630 - cytochrome c oxidase, cbb3-type, subunit III, at 1,713,274 to 1,714,173
_1630
Dsui_1631: Dsui_1631 - cytochrome c oxidase accessory protein FixG, at 1,714,313 to 1,715,725
_1631
Dsui_1632: Dsui_1632 - hypothetical protein, at 1,715,744 to 1,716,268
_1632
Dsui_1633: Dsui_1633 - Protein of unknown function (DUF3149), at 1,716,286 to 1,716,420
_1633
Dsui_1634: Dsui_1634 - universal stress protein UspA-like protein, at 1,716,490 to 1,716,933
_1634
Position (kb)
1714
1715
1716 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1714.239 kb on + strand at 1714.239 kb on + strand at 1714.247 kb on - strand at 1714.268 kb on + strand at 1714.274 kb on + strand at 1714.290 kb on - strand at 1714.401 kb on + strand at 1714.456 kb on + strand, within Dsui_1631 at 1714.664 kb on + strand, within Dsui_1631 at 1714.694 kb on - strand, within Dsui_1631 at 1714.699 kb on + strand, within Dsui_1631 at 1714.707 kb on - strand, within Dsui_1631 at 1714.732 kb on + strand, within Dsui_1631 at 1714.823 kb on - strand, within Dsui_1631 at 1715.092 kb on + strand, within Dsui_1631 at 1715.092 kb on + strand, within Dsui_1631 at 1715.100 kb on - strand, within Dsui_1631 at 1715.121 kb on + strand, within Dsui_1631 at 1715.167 kb on + strand, within Dsui_1631 at 1715.276 kb on + strand, within Dsui_1631 at 1715.284 kb on + strand, within Dsui_1631 at 1715.411 kb on - strand, within Dsui_1631 at 1715.429 kb on + strand, within Dsui_1631 at 1715.442 kb on - strand, within Dsui_1631 at 1715.467 kb on + strand, within Dsui_1631 at 1715.597 kb on + strand at 1715.639 kb on - strand at 1715.709 kb on + strand at 1716.228 kb on + strand at 1716.228 kb on + strand at 1716.236 kb on - strand at 1716.276 kb on + strand at 1716.282 kb on + strand at 1716.282 kb on + strand at 1716.290 kb on - strand at 1716.344 kb on + strand, within Dsui_1633 at 1716.344 kb on + strand, within Dsui_1633 at 1716.354 kb on + strand, within Dsui_1633 at 1716.371 kb on + strand, within Dsui_1633 at 1716.422 kb on - strand at 1716.489 kb on - strand at 1716.489 kb on - strand at 1716.501 kb on - strand at 1716.507 kb on - strand at 1716.513 kb on + strand at 1716.523 kb on + strand at 1716.531 kb on - strand at 1716.531 kb on - strand at 1716.531 kb on - strand at 1716.531 kb on - strand at 1716.531 kb on - strand at 1716.540 kb on - strand, within Dsui_1634 at 1716.683 kb on + strand, within Dsui_1634 at 1716.683 kb on + strand, within Dsui_1634 at 1716.683 kb on + strand, within Dsui_1634 at 1716.683 kb on + strand, within Dsui_1634
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 1,714,239 + +0.1 1,714,239 + +0.1 1,714,247 - -0.4 1,714,268 + +0.7 1,714,274 + +0.1 1,714,290 - +0.1 1,714,401 + -0.9 1,714,456 + Dsui_1631 0.10 -0.8 1,714,664 + Dsui_1631 0.25 -1.4 1,714,694 - Dsui_1631 0.27 -3.0 1,714,699 + Dsui_1631 0.27 -0.6 1,714,707 - Dsui_1631 0.28 -1.7 1,714,732 + Dsui_1631 0.30 -1.7 1,714,823 - Dsui_1631 0.36 -3.4 1,715,092 + Dsui_1631 0.55 -0.6 1,715,092 + Dsui_1631 0.55 -0.9 1,715,100 - Dsui_1631 0.56 -0.4 1,715,121 + Dsui_1631 0.57 -0.6 1,715,167 + Dsui_1631 0.60 -1.0 1,715,276 + Dsui_1631 0.68 -0.8 1,715,284 + Dsui_1631 0.69 -0.6 1,715,411 - Dsui_1631 0.78 -1.6 1,715,429 + Dsui_1631 0.79 -1.3 1,715,442 - Dsui_1631 0.80 -1.7 1,715,467 + Dsui_1631 0.82 -0.5 1,715,597 + -0.7 1,715,639 - -1.1 1,715,709 + -0.3 1,716,228 + +0.1 1,716,228 + +0.3 1,716,236 - +0.2 1,716,276 + +0.4 1,716,282 + +0.2 1,716,282 + +0.2 1,716,290 - +0.0 1,716,344 + Dsui_1633 0.43 +0.2 1,716,344 + Dsui_1633 0.43 +0.2 1,716,354 + Dsui_1633 0.50 -0.0 1,716,371 + Dsui_1633 0.63 +0.2 1,716,422 - +0.1 1,716,489 - +0.6 1,716,489 - +0.4 1,716,501 - -0.6 1,716,507 - -0.4 1,716,513 + +0.3 1,716,523 + -0.4 1,716,531 - -0.2 1,716,531 - -1.1 1,716,531 - -0.3 1,716,531 - -0.3 1,716,531 - -1.1 1,716,540 - Dsui_1634 0.11 -0.3 1,716,683 + Dsui_1634 0.43 -0.1 1,716,683 + Dsui_1634 0.43 -0.8 1,716,683 + Dsui_1634 0.43 +0.2 1,716,683 + Dsui_1634 0.43 -0.1
Or see this region's nucleotide sequence