Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0993 and Dsui_0994 overlap by 1 nucleotides Dsui_0994 and Dsui_0995 are separated by 18 nucleotides Dsui_0995 and Dsui_0996 are separated by 75 nucleotides
Dsui_0993: Dsui_0993 - polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase, at 1,019,699 to 1,020,316
_0993
Dsui_0994: Dsui_0994 - peptidase S16, lon domain protein, at 1,020,316 to 1,020,957
_0994
Dsui_0995: Dsui_0995 - arabinose efflux permease family protein, at 1,020,976 to 1,022,196
_0995
Dsui_0996: Dsui_0996 - soluble lytic murein transglycosylase-like protein, at 1,022,272 to 1,022,979
_0996
Position (kb)
1020
1021
1022
1023 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1020.458 kb on - strand, within Dsui_0994 at 1020.463 kb on - strand at 1020.500 kb on - strand, within Dsui_0994 at 1020.514 kb on + strand, within Dsui_0994 at 1020.730 kb on + strand, within Dsui_0994 at 1020.747 kb on - strand, within Dsui_0994 at 1020.951 kb on + strand at 1020.976 kb on - strand at 1021.067 kb on - strand at 1021.244 kb on - strand, within Dsui_0995 at 1021.389 kb on + strand, within Dsui_0995 at 1021.476 kb on - strand, within Dsui_0995 at 1021.640 kb on + strand, within Dsui_0995 at 1021.648 kb on - strand, within Dsui_0995 at 1021.648 kb on - strand at 1021.696 kb on - strand at 1021.811 kb on - strand, within Dsui_0995 at 1021.971 kb on - strand, within Dsui_0995 at 1022.011 kb on + strand, within Dsui_0995 at 1022.050 kb on + strand, within Dsui_0995 at 1022.123 kb on + strand at 1022.131 kb on - strand at 1022.159 kb on - strand at 1022.185 kb on + strand at 1022.239 kb on + strand at 1022.339 kb on + strand at 1022.344 kb on + strand, within Dsui_0996 at 1022.552 kb on + strand, within Dsui_0996 at 1022.643 kb on - strand, within Dsui_0996 at 1022.701 kb on + strand, within Dsui_0996 at 1022.701 kb on + strand, within Dsui_0996 at 1022.709 kb on - strand, within Dsui_0996 at 1022.901 kb on + strand, within Dsui_0996 at 1022.906 kb on + strand, within Dsui_0996 at 1022.909 kb on - strand at 1022.919 kb on - strand at 1023.015 kb on + strand at 1023.034 kb on - strand at 1023.121 kb on + strand at 1023.131 kb on + strand at 1023.132 kb on + strand at 1023.133 kb on + strand at 1023.141 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 1,020,458 - Dsui_0994 0.22 +0.5 1,020,463 - +0.2 1,020,500 - Dsui_0994 0.29 +0.3 1,020,514 + Dsui_0994 0.31 +0.5 1,020,730 + Dsui_0994 0.64 +0.6 1,020,747 - Dsui_0994 0.67 +0.4 1,020,951 + -0.0 1,020,976 - +0.1 1,021,067 - +0.7 1,021,244 - Dsui_0995 0.22 +0.5 1,021,389 + Dsui_0995 0.34 +0.3 1,021,476 - Dsui_0995 0.41 +0.3 1,021,640 + Dsui_0995 0.54 +0.8 1,021,648 - Dsui_0995 0.55 +0.4 1,021,648 - +2.4 1,021,696 - +2.4 1,021,811 - Dsui_0995 0.68 +1.4 1,021,971 - Dsui_0995 0.81 -0.1 1,022,011 + Dsui_0995 0.85 +0.0 1,022,050 + Dsui_0995 0.88 +1.0 1,022,123 + +0.2 1,022,131 - -0.1 1,022,159 - +0.5 1,022,185 + +0.5 1,022,239 + -0.7 1,022,339 + -0.2 1,022,344 + Dsui_0996 0.10 +0.0 1,022,552 + Dsui_0996 0.40 +0.1 1,022,643 - Dsui_0996 0.52 -0.3 1,022,701 + Dsui_0996 0.61 +0.6 1,022,701 + Dsui_0996 0.61 -0.1 1,022,709 - Dsui_0996 0.62 +0.2 1,022,901 + Dsui_0996 0.89 -1.9 1,022,906 + Dsui_0996 0.90 -0.2 1,022,909 - +0.4 1,022,919 - +0.5 1,023,015 + +1.1 1,023,034 - -0.5 1,023,121 + +0.0 1,023,131 + -0.4 1,023,132 + -1.1 1,023,133 + +0.1 1,023,141 - +0.2
Or see this region's nucleotide sequence