Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0943 and Dsui_0944 are separated by 44 nucleotides Dsui_0944 and Dsui_0945 are separated by 156 nucleotides Dsui_0945 and Dsui_0946 are separated by 10 nucleotides Dsui_0946 and Dsui_0947 are separated by 5 nucleotides Dsui_0947 and Dsui_0948 are separated by 5 nucleotides
Dsui_0943: Dsui_0943 - nitrogenase cofactor biosynthesis protein NifB, at 971,700 to 973,223
_0943
Dsui_0944: Dsui_0944 - putative NADH:ubiquinone oxidoreductase, subunit RnfB, at 973,268 to 973,483
_0944
Dsui_0945: Dsui_0945 - Iron-sulfur cluster assembly accessory protein, at 973,640 to 974,056
_0945
Dsui_0946: Dsui_0946 - putative nitrogen fixation protein FixT, at 974,067 to 974,561
_0946
Dsui_0947: Dsui_0947 - hypothetical protein, at 974,567 to 975,425
_0947
Dsui_0948: Dsui_0948 - hypothetical protein, at 975,431 to 975,850
_0948
Position (kb) 974
975 Strain fitness (log2 ratio) -1
0
1
2 at 973.125 kb on + strand at 973.148 kb on + strand at 973.148 kb on + strand at 973.171 kb on + strand at 973.179 kb on - strand at 973.227 kb on - strand at 973.255 kb on - strand at 973.373 kb on + strand, within Dsui_0944 at 973.417 kb on + strand, within Dsui_0944 at 973.536 kb on + strand at 973.556 kb on - strand at 973.580 kb on - strand at 973.588 kb on + strand at 973.588 kb on + strand at 973.596 kb on + strand at 973.816 kb on + strand, within Dsui_0945 at 973.864 kb on + strand, within Dsui_0945 at 973.907 kb on - strand, within Dsui_0945 at 974.081 kb on - strand at 974.207 kb on - strand, within Dsui_0946 at 974.265 kb on + strand, within Dsui_0946 at 974.340 kb on - strand, within Dsui_0946 at 974.340 kb on - strand at 974.523 kb on - strand at 974.647 kb on + strand at 974.694 kb on - strand, within Dsui_0947 at 974.771 kb on + strand, within Dsui_0947 at 974.877 kb on + strand, within Dsui_0947 at 974.959 kb on + strand, within Dsui_0947 at 975.083 kb on - strand, within Dsui_0947 at 975.355 kb on - strand at 975.410 kb on - strand at 975.468 kb on + strand at 975.543 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 973,125 + -0.1 973,148 + +0.8 973,148 + -0.1 973,171 + +1.8 973,179 - +1.1 973,227 - +0.1 973,255 - +0.5 973,373 + Dsui_0944 0.49 -0.2 973,417 + Dsui_0944 0.69 +0.7 973,536 + -0.1 973,556 - +0.0 973,580 - +0.4 973,588 + +1.1 973,588 + +1.9 973,596 + +1.1 973,816 + Dsui_0945 0.42 +1.0 973,864 + Dsui_0945 0.54 +0.4 973,907 - Dsui_0945 0.64 +0.2 974,081 - +0.0 974,207 - Dsui_0946 0.28 -0.3 974,265 + Dsui_0946 0.40 -0.9 974,340 - Dsui_0946 0.55 -1.1 974,340 - +1.8 974,523 - +0.2 974,647 + -0.1 974,694 - Dsui_0947 0.15 -0.3 974,771 + Dsui_0947 0.24 +0.4 974,877 + Dsui_0947 0.36 -0.5 974,959 + Dsui_0947 0.46 +1.2 975,083 - Dsui_0947 0.60 -0.3 975,355 - -0.0 975,410 - +0.3 975,468 + -0.1 975,543 + +1.4
Or see this region's nucleotide sequence