Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0461 and Dsui_0462 are separated by 83 nucleotides Dsui_0462 and Dsui_0463 are separated by 47 nucleotides
Dsui_0461: Dsui_0461 - glycosyltransferase, at 466,696 to 467,832
_0461
Dsui_0462: Dsui_0462 - ADP-heptose:LPS heptosyltransferase, at 467,916 to 468,938
_0462
Dsui_0463: Dsui_0463 - hypothetical protein, at 468,986 to 470,323
_0463
Position (kb) 467
468
469 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 466.947 kb on + strand, within Dsui_0461 at 467.042 kb on - strand, within Dsui_0461 at 467.107 kb on - strand, within Dsui_0461 at 467.130 kb on - strand, within Dsui_0461 at 467.258 kb on - strand, within Dsui_0461 at 467.447 kb on + strand, within Dsui_0461 at 467.449 kb on + strand, within Dsui_0461 at 467.508 kb on + strand, within Dsui_0461 at 467.532 kb on - strand, within Dsui_0461 at 467.605 kb on + strand, within Dsui_0461 at 467.699 kb on - strand, within Dsui_0461 at 467.759 kb on + strand at 467.777 kb on + strand at 467.785 kb on - strand at 467.785 kb on - strand at 467.787 kb on - strand at 467.852 kb on - strand at 467.890 kb on - strand at 467.890 kb on - strand at 467.896 kb on + strand at 467.953 kb on - strand at 467.975 kb on + strand at 468.018 kb on - strand at 468.026 kb on - strand, within Dsui_0462 at 468.134 kb on - strand, within Dsui_0462 at 468.214 kb on - strand, within Dsui_0462 at 468.257 kb on - strand, within Dsui_0462 at 468.347 kb on - strand, within Dsui_0462 at 468.362 kb on - strand, within Dsui_0462 at 468.363 kb on - strand, within Dsui_0462 at 468.445 kb on + strand, within Dsui_0462 at 468.457 kb on - strand, within Dsui_0462 at 468.527 kb on + strand, within Dsui_0462 at 468.576 kb on + strand, within Dsui_0462 at 468.665 kb on - strand, within Dsui_0462 at 468.709 kb on - strand, within Dsui_0462 at 468.719 kb on + strand, within Dsui_0462 at 468.732 kb on + strand, within Dsui_0462 at 468.949 kb on + strand at 469.009 kb on - strand at 469.071 kb on - strand at 469.080 kb on + strand at 469.088 kb on - strand at 469.088 kb on - strand at 469.207 kb on + strand, within Dsui_0463 at 469.312 kb on - strand, within Dsui_0463 at 469.323 kb on - strand, within Dsui_0463 at 469.333 kb on - strand, within Dsui_0463 at 469.386 kb on - strand at 469.501 kb on - strand, within Dsui_0463 at 469.513 kb on + strand, within Dsui_0463 at 469.555 kb on + strand, within Dsui_0463 at 469.579 kb on - strand, within Dsui_0463 at 469.588 kb on + strand, within Dsui_0463 at 469.722 kb on - strand, within Dsui_0463 at 469.761 kb on + strand, within Dsui_0463 at 469.785 kb on - strand at 469.818 kb on + strand, within Dsui_0463 at 469.858 kb on + strand, within Dsui_0463 at 469.910 kb on - strand, within Dsui_0463 at 469.920 kb on - strand, within Dsui_0463
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 466,947 + Dsui_0461 0.22 -0.4 467,042 - Dsui_0461 0.30 -0.3 467,107 - Dsui_0461 0.36 -0.3 467,130 - Dsui_0461 0.38 -1.3 467,258 - Dsui_0461 0.49 +0.4 467,447 + Dsui_0461 0.66 -0.4 467,449 + Dsui_0461 0.66 -0.2 467,508 + Dsui_0461 0.71 +0.8 467,532 - Dsui_0461 0.74 -1.2 467,605 + Dsui_0461 0.80 -0.5 467,699 - Dsui_0461 0.88 -0.3 467,759 + -0.9 467,777 + -0.8 467,785 - -0.8 467,785 - -0.8 467,787 - -0.7 467,852 - +0.8 467,890 - +0.2 467,890 - +1.6 467,896 + +0.7 467,953 - -0.3 467,975 + -0.6 468,018 - -1.5 468,026 - Dsui_0462 0.11 -0.6 468,134 - Dsui_0462 0.21 -0.8 468,214 - Dsui_0462 0.29 -0.5 468,257 - Dsui_0462 0.33 -0.0 468,347 - Dsui_0462 0.42 -2.8 468,362 - Dsui_0462 0.44 -2.6 468,363 - Dsui_0462 0.44 -0.7 468,445 + Dsui_0462 0.52 -1.2 468,457 - Dsui_0462 0.53 -1.2 468,527 + Dsui_0462 0.60 -1.3 468,576 + Dsui_0462 0.65 -0.2 468,665 - Dsui_0462 0.73 -0.5 468,709 - Dsui_0462 0.78 -0.5 468,719 + Dsui_0462 0.78 -0.8 468,732 + Dsui_0462 0.80 -0.6 468,949 + +0.8 469,009 - -0.6 469,071 - +0.4 469,080 + +0.9 469,088 - -1.6 469,088 - +0.1 469,207 + Dsui_0463 0.17 +0.7 469,312 - Dsui_0463 0.24 -0.8 469,323 - Dsui_0463 0.25 -0.2 469,333 - Dsui_0463 0.26 +0.8 469,386 - -1.0 469,501 - Dsui_0463 0.38 -0.8 469,513 + Dsui_0463 0.39 -0.4 469,555 + Dsui_0463 0.43 +0.0 469,579 - Dsui_0463 0.44 -1.8 469,588 + Dsui_0463 0.45 -2.2 469,722 - Dsui_0463 0.55 -1.1 469,761 + Dsui_0463 0.58 +1.4 469,785 - -0.2 469,818 + Dsui_0463 0.62 -0.4 469,858 + Dsui_0463 0.65 -0.3 469,910 - Dsui_0463 0.69 +0.1 469,920 - Dsui_0463 0.70 -0.7
Or see this region's nucleotide sequence