Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0314 and Dsui_0315 are separated by 41 nucleotides Dsui_0315 and Dsui_0316 are separated by 92 nucleotides Dsui_0316 and Dsui_0317 are separated by 170 nucleotides
Dsui_0314: Dsui_0314 - cell division protein, at 316,216 to 317,061
_0314
Dsui_0315: Dsui_0315 - Protein of unknown function (DUF2802), at 317,103 to 317,657
_0315
Dsui_0316: Dsui_0316 - hypothetical protein, at 317,750 to 318,253
_0316
Dsui_0317: Dsui_0317 - acetyl-CoA acetyltransferase, at 318,424 to 319,623
_0317
Position (kb) 317
318 Strain fitness (log2 ratio) -1
0
1
2 at 316.109 kb on + strand at 316.168 kb on - strand at 316.214 kb on - strand at 316.273 kb on - strand at 316.313 kb on + strand, within Dsui_0314 at 316.327 kb on - strand, within Dsui_0314 at 316.359 kb on + strand, within Dsui_0314 at 316.411 kb on + strand at 316.459 kb on - strand, within Dsui_0314 at 316.701 kb on + strand, within Dsui_0314 at 316.951 kb on - strand, within Dsui_0314 at 316.962 kb on - strand, within Dsui_0314 at 316.973 kb on - strand, within Dsui_0314 at 317.008 kb on - strand at 317.143 kb on + strand at 317.143 kb on + strand at 317.248 kb on + strand, within Dsui_0315 at 317.248 kb on + strand, within Dsui_0315 at 317.256 kb on - strand, within Dsui_0315 at 317.256 kb on - strand, within Dsui_0315 at 317.288 kb on + strand, within Dsui_0315 at 317.339 kb on + strand, within Dsui_0315 at 317.427 kb on + strand at 317.427 kb on + strand, within Dsui_0315 at 317.435 kb on - strand, within Dsui_0315 at 317.435 kb on - strand, within Dsui_0315 at 317.435 kb on - strand, within Dsui_0315 at 317.435 kb on - strand, within Dsui_0315 at 317.616 kb on - strand at 317.633 kb on + strand at 317.745 kb on - strand at 317.747 kb on + strand at 317.806 kb on + strand, within Dsui_0316 at 317.821 kb on - strand at 317.821 kb on - strand, within Dsui_0316 at 317.822 kb on - strand, within Dsui_0316 at 317.850 kb on + strand, within Dsui_0316 at 317.961 kb on - strand, within Dsui_0316 at 318.265 kb on + strand at 318.339 kb on + strand at 318.339 kb on + strand at 318.347 kb on - strand at 318.390 kb on + strand at 318.439 kb on - strand at 318.439 kb on - strand at 318.449 kb on - strand at 318.623 kb on - strand, within Dsui_0317
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 316,109 + +2.7 316,168 - +0.5 316,214 - +0.1 316,273 - -1.5 316,313 + Dsui_0314 0.11 -0.1 316,327 - Dsui_0314 0.13 -0.5 316,359 + Dsui_0314 0.17 +1.3 316,411 + -0.2 316,459 - Dsui_0314 0.29 -1.0 316,701 + Dsui_0314 0.57 -0.5 316,951 - Dsui_0314 0.87 -0.4 316,962 - Dsui_0314 0.88 -0.3 316,973 - Dsui_0314 0.89 -0.6 317,008 - -1.1 317,143 + -0.6 317,143 + -1.3 317,248 + Dsui_0315 0.26 -1.0 317,248 + Dsui_0315 0.26 +0.2 317,256 - Dsui_0315 0.28 -0.4 317,256 - Dsui_0315 0.28 -0.6 317,288 + Dsui_0315 0.33 -0.9 317,339 + Dsui_0315 0.43 -0.9 317,427 + +1.1 317,427 + Dsui_0315 0.58 -0.7 317,435 - Dsui_0315 0.60 -0.8 317,435 - Dsui_0315 0.60 -0.4 317,435 - Dsui_0315 0.60 -0.5 317,435 - Dsui_0315 0.60 -0.4 317,616 - -1.0 317,633 + -0.9 317,745 - +1.1 317,747 + -0.7 317,806 + Dsui_0316 0.11 +0.7 317,821 - +0.8 317,821 - Dsui_0316 0.14 +0.3 317,822 - Dsui_0316 0.14 +0.4 317,850 + Dsui_0316 0.20 -0.1 317,961 - Dsui_0316 0.42 +1.4 318,265 + +1.4 318,339 + -0.8 318,339 + +0.4 318,347 - -1.6 318,390 + -1.7 318,439 - +0.3 318,439 - +0.4 318,449 - +0.4 318,623 - Dsui_0317 0.17 +0.8
Or see this region's nucleotide sequence