Strain Fitness in Shewanella amazonensis SB2B around Sama_3494

Experiment: Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine
4,123,280	+		Sama_3492	0.18	-1.5
4,123,280	+		Sama_3492	0.18	-2.0
4,123,280	+		Sama_3492	0.18	+0.3
4,123,280	+		Sama_3492	0.18	-0.9
4,123,280	+		Sama_3492	0.18	+0.1
4,123,280	+		Sama_3492	0.18	-2.2
4,123,281	-		Sama_3492	0.19	-0.0
4,123,281	-		Sama_3492	0.19	-0.5
4,123,281	-		Sama_3492	0.19	-1.0
4,123,305	+		Sama_3492	0.22	+0.7
4,123,306	-		Sama_3492	0.22	+0.9
4,123,315	+		Sama_3492	0.24	+0.6
4,123,316	-		Sama_3492	0.24	+0.1
4,123,391	+		Sama_3492	0.36	-0.7
4,123,392	-		Sama_3492	0.36	-1.2
4,123,532	+		Sama_3492	0.58	+0.0
4,123,533	-		Sama_3492	0.58	-0.7
4,123,587	+		Sama_3492	0.67	-0.7
4,123,587	+		Sama_3492	0.67	+0.8
4,123,587	+		Sama_3492	0.67	+0.4
4,123,587	+		Sama_3492	0.67	-1.3
4,123,587	+		Sama_3492	0.67	-0.9
4,123,587	+		Sama_3492	0.67	-0.5
4,123,587	+		Sama_3492	0.67	+1.5
4,123,587	+		Sama_3492	0.67	+0.9
4,123,588	-		Sama_3492	0.67	+0.6
4,123,588	-		Sama_3492	0.67	-0.8
4,123,588	-		Sama_3492	0.67	-1.4
4,123,588	-		Sama_3492	0.67	-0.1
4,123,588	-		Sama_3492	0.67	-1.3
4,123,588	-		Sama_3492	0.67	-0.7
4,123,589	+		Sama_3492	0.67	+0.2
4,123,589	+		Sama_3492	0.67	-0.2
4,123,590	-		Sama_3492	0.67	+0.1
4,123,619	+		Sama_3492	0.72	+1.0
4,123,619	+		Sama_3492	0.72	+1.4
4,123,619	+		Sama_3492	0.72	+0.7
4,123,619	+		Sama_3492	0.72	-2.8
4,123,619	+		Sama_3492	0.72	-1.6
4,123,619	+		Sama_3492	0.72	+1.1
4,123,619	+		Sama_3492	0.72	+1.6
4,123,619	+		Sama_3492	0.72	-0.6
4,123,619	+		Sama_3492	0.72	+0.3
4,123,619	+		Sama_3492	0.72	+0.4
4,123,620	-		Sama_3492	0.72	+0.9
4,123,620	-		Sama_3492	0.72	+2.5
4,123,620	-		Sama_3492	0.72	+0.4
4,123,620	-		Sama_3492	0.72	+0.3
4,123,620	-		Sama_3492	0.72	+1.4
4,123,629	+		Sama_3492	0.73	+0.8
4,123,629	+		Sama_3492	0.73	-0.2
4,123,629	+		Sama_3492	0.73	-0.6
4,123,629	+		Sama_3492	0.73	-0.2
4,123,629	+		Sama_3492	0.73	+0.5
4,123,629	+		Sama_3492	0.73	-0.1
4,123,629	+		Sama_3492	0.73	+0.8
4,123,629	+		Sama_3492	0.73	-0.3
4,123,629	+		Sama_3492	0.73	+0.0
4,123,629	+		Sama_3492	0.73	-0.3
4,123,630	-		Sama_3492	0.73	+0.7
4,123,630	-		Sama_3492	0.73	+0.5
4,123,630	-		Sama_3492	0.73	+0.4
4,123,630	-		Sama_3492	0.73	+0.6
4,123,630	-		Sama_3492	0.73	+2.4
4,123,630	-		Sama_3492	0.73	-2.9
4,123,630	-		Sama_3492	0.73	-1.4
4,123,630	-		Sama_3492	0.73	-1.7
4,123,630	-		Sama_3492	0.73	-0.2
4,123,630	-		Sama_3492	0.73	-0.6
4,123,630	-		Sama_3492	0.73	-1.4
4,123,630	-		Sama_3492	0.73	-0.2
4,123,700	+		Sama_3492	0.84	+0.0
4,123,701	-		Sama_3492	0.85	-0.4
4,123,746	+				+1.0
4,123,746	+				-0.3
4,123,747	-				+0.3
4,123,747	-				+1.4
4,123,747	-				+1.6
4,123,747	-				-2.5
4,123,771	+				-0.3
4,123,771	+				-0.2
4,123,771	+				-0.1
4,123,772	-				-0.7
4,123,772	-				-0.5
4,123,806	-				-0.6
4,123,806	-				+0.6
4,123,806	-				-0.5
4,123,888	+				+1.4
4,123,888	+				-0.9
4,123,889	-				-2.2
4,123,917	+				-1.1
4,123,917	+				+0.3
4,123,917	+				-0.7
4,123,918	-				+0.9
4,123,918	-				+1.4
4,123,918	-				-1.3
4,123,930	+				-0.2
4,123,930	+				-0.1
4,123,930	+				+0.4
4,123,966	+				-1.6
4,123,966	+				+0.8
4,123,966	+				+0.7
4,123,966	+				-0.4
4,123,966	+				-0.8
4,123,967	-				-0.9
4,123,967	-				+0.3
4,123,967	-				+0.7
4,123,967	-				+1.2
4,123,967	-				+1.1
4,123,967	-				+1.1
4,123,967	-				+0.7
4,123,967	-				-2.7
4,123,967	-				-0.4
4,123,967	-				-0.2
4,123,983	+				-1.7
4,123,983	+				+0.4
4,124,014	+		Sama_3493	0.17	-1.9
4,124,023	+		Sama_3493	0.20	+0.3
4,124,023	+		Sama_3493	0.20	+0.1
4,124,023	+		Sama_3493	0.20	-0.7
4,124,023	+		Sama_3493	0.20	+1.1
4,124,027	+		Sama_3493	0.21	-1.3
4,124,028	-		Sama_3493	0.22	-1.6
4,124,028	-		Sama_3493	0.22	-0.1
4,124,038	-		Sama_3493	0.25	+0.0
4,124,156	-		Sama_3493	0.67	-0.7
4,124,179	-		Sama_3493	0.75	-1.4
4,124,179	-		Sama_3493	0.75	-1.9
4,124,232	+				+0.4
4,124,246	+				-0.8
4,124,246	+				+0.9
4,124,247	-				-0.4
4,124,262	+				+0.2
4,124,262	+				+1.0
4,124,262	+				-2.0
4,124,262	+				+0.4
4,124,262	+				-0.1
4,124,262	+				+0.2
4,124,262	+				-0.7
4,124,263	-				-0.7
4,124,263	-				-1.0
4,124,263	-				+0.1
4,124,263	-				-0.9
4,124,263	-				-0.1
4,124,263	-				+0.6
4,124,263	-				-0.5
4,124,263	-				+0.6
4,124,319	+		Sama_3494	0.15	-1.4
4,124,319	+		Sama_3494	0.15	-0.3
4,124,320	-		Sama_3494	0.16	-2.8
4,124,375	+		Sama_3494	0.31	-1.9
4,124,375	+		Sama_3494	0.31	-1.2
4,124,376	-		Sama_3494	0.31	+0.7
4,124,376	-		Sama_3494	0.31	-0.6
4,124,398	+		Sama_3494	0.37	-1.7
4,124,399	-		Sama_3494	0.37	-0.2
4,124,420	+		Sama_3494	0.43	-2.3
4,124,420	+		Sama_3494	0.43	+0.4
4,124,420	+		Sama_3494	0.43	-0.5
4,124,420	+		Sama_3494	0.43	+1.3
4,124,420	+		Sama_3494	0.43	+0.2
4,124,420	+		Sama_3494	0.43	+0.6
4,124,420	+		Sama_3494	0.43	-3.4
4,124,420	+		Sama_3494	0.43	-0.2
4,124,420	+		Sama_3494	0.43	-1.9
4,124,420	+		Sama_3494	0.43	-1.1
4,124,420	+		Sama_3494	0.43	+0.4
4,124,420	+		Sama_3494	0.43	-1.0
4,124,420	+		Sama_3494	0.43	+0.2
4,124,420	+		Sama_3494	0.43	+0.8
4,124,420	+		Sama_3494	0.43	-0.3
4,124,421	-		Sama_3494	0.44	-0.7
4,124,421	-		Sama_3494	0.44	-0.5
4,124,421	-		Sama_3494	0.44	-1.3
4,124,421	-		Sama_3494	0.44	+2.4
4,124,421	-		Sama_3494	0.44	-0.7
4,124,421	-		Sama_3494	0.44	-1.4
4,124,421	-		Sama_3494	0.44	-2.1
4,124,421	-		Sama_3494	0.44	-0.7
4,124,421	-		Sama_3494	0.44	-1.4
4,124,421	-		Sama_3494	0.44	-0.1
4,124,421	-		Sama_3494	0.44	-0.9
4,124,421	-		Sama_3494	0.44	-2.0
4,124,424	+		Sama_3494	0.44	-0.3
4,124,424	+		Sama_3494	0.44	-0.0
4,124,425	-		Sama_3494	0.45	+0.0
4,124,425	-		Sama_3494	0.45	-0.2
4,124,425	-		Sama_3494	0.45	+0.4
4,124,425	-		Sama_3494	0.45	+1.9
4,124,425	-		Sama_3494	0.45	-0.0
4,124,425	-		Sama_3494	0.45	+0.5
4,124,425	-		Sama_3494	0.45	+0.0
4,124,425	-		Sama_3494	0.45	-1.0
4,124,444	+		Sama_3494	0.50	-0.3
4,124,444	+		Sama_3494	0.50	+0.2
4,124,444	+		Sama_3494	0.50	-2.8
4,124,444	+		Sama_3494	0.50	+2.0
4,124,444	+		Sama_3494	0.50	+0.6
4,124,444	+		Sama_3494	0.50	+0.2
4,124,445	-		Sama_3494	0.50	+1.4
4,124,445	-		Sama_3494	0.50	-0.6
4,124,445	-		Sama_3494	0.50	-0.2
4,124,479	+		Sama_3494	0.60	-0.8
4,124,480	-		Sama_3494	0.60	-0.9
4,124,487	+		Sama_3494	0.62	+0.3
4,124,487	+		Sama_3494	0.62	+0.7
4,124,526	+		Sama_3494	0.72	-1.7
4,124,526	+		Sama_3494	0.72	-1.2
4,124,527	-		Sama_3494	0.73	-1.1
4,124,556	+		Sama_3494	0.81	-0.4
4,124,556	+		Sama_3494	0.81	+0.4
4,124,556	+		Sama_3494	0.81	-0.2
4,124,557	-		Sama_3494	0.81	-1.4
4,124,557	-		Sama_3494	0.81	+0.9
4,124,640	-				-1.5
4,124,640	-				-1.6
4,124,640	-				+0.4
4,124,652	+				-2.7
4,124,652	+				+0.4
4,124,652	+				+0.5
4,124,652	+				+1.7
4,124,652	+				-1.7
4,124,652	+				-1.0
4,124,653	-				+0.1
4,124,653	-				+0.3
4,124,653	-				-1.0
4,124,653	-				+1.9
4,124,653	-				-1.2
4,124,653	-				-0.3
4,124,653	-				+0.6
4,124,653	-				-0.8
4,124,653	-				+1.4
4,124,653	-				+1.4
4,124,653	-				-1.3
4,124,653	-				+0.6
4,124,653	-				-0.1
4,124,653	-				-1.2
4,124,653	-				+0.3
4,124,653	-				+1.0
4,124,659	+				+0.1
4,124,659	+				-0.2
4,124,692	+				+0.9
4,124,693	-				-0.7
4,124,711	-				+0.9
4,124,764	+				+1.4
4,124,764	+				+0.1
4,124,821	+				-0.9
4,124,821	+				+0.1
4,124,821	+				-0.0
4,124,822	-				-0.0
4,124,822	-				-0.4
4,124,822	-				-0.2
4,124,837	+				+1.4
4,124,837	+				-0.0
4,124,837	+				-0.5
4,124,837	+				-0.6
4,124,837	+				-0.9
4,124,838	-				-1.7
4,124,838	-				-1.2
4,124,838	-				+1.2
4,124,838	-				+2.8
4,124,838	-				-0.7
4,125,016	+		Sama_3495	0.18	-2.0
4,125,017	-		Sama_3495	0.18	+0.4
4,125,017	-		Sama_3495	0.18	-0.8
4,125,133	+		Sama_3495	0.23	-1.4
4,125,133	+		Sama_3495	0.23	-0.3
4,125,133	+		Sama_3495	0.23	-2.0
4,125,134	-		Sama_3495	0.23	-0.9
4,125,134	-		Sama_3495	0.23	+0.3
4,125,254	+		Sama_3495	0.29	+0.2
4,125,254	+		Sama_3495	0.29	-1.2
4,125,254	+		Sama_3495	0.29	-0.7
4,125,254	+		Sama_3495	0.29	+1.4
4,125,255	-		Sama_3495	0.29	-0.7
4,125,271	-		Sama_3495	0.30	+1.2
4,125,347	+		Sama_3495	0.34	+0.7
4,125,348	-		Sama_3495	0.34	-0.2
4,125,379	+		Sama_3495	0.35	-2.3
4,125,380	-		Sama_3495	0.35	+0.6
4,125,432	+		Sama_3495	0.38	-0.2
4,125,433	-		Sama_3495	0.38	-0.4
4,125,433	-		Sama_3495	0.38	+0.3
4,125,433	-		Sama_3495	0.38	-0.4
4,125,495	+		Sama_3495	0.41	-1.4
4,125,586	+		Sama_3495	0.45	-0.2
4,125,586	+		Sama_3495	0.45	+0.6
4,125,586	+		Sama_3495	0.45	-0.1
4,125,587	-		Sama_3495	0.45	+1.0
4,125,587	-		Sama_3495	0.45	-1.4
4,125,587	-		Sama_3495	0.45	+0.2