Strain Fitness in Shewanella amazonensis SB2B around Sama_0867

Experiment: Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine
1,057,245	+		Sama_0865	0.80	-1.5
1,057,245	+		Sama_0865	0.80	-2.8
1,057,245	+		Sama_0865	0.80	+1.1
1,057,246	-		Sama_0865	0.81	-1.6
1,057,246	-		Sama_0865	0.81	+0.2
1,057,261	+		Sama_0865	0.83	-0.1
1,057,261	+		Sama_0865	0.83	-0.6
1,057,261	+		Sama_0865	0.83	-1.1
1,057,262	-		Sama_0865	0.83	-2.4
1,057,262	-		Sama_0865	0.83	-0.0
1,057,262	-		Sama_0865	0.83	-0.5
1,057,262	-		Sama_0865	0.83	-0.2
1,057,267	+		Sama_0865	0.83	-0.1
1,057,267	+		Sama_0865	0.83	+1.1
1,057,267	+		Sama_0865	0.83	-0.7
1,057,268	-		Sama_0865	0.83	-1.5
1,057,268	-		Sama_0865	0.83	-1.2
1,057,268	-		Sama_0865	0.83	+1.4
1,057,268	-		Sama_0865	0.83	-0.6
1,057,268	-		Sama_0865	0.83	-1.9
1,057,268	-		Sama_0865	0.83	+2.7
1,057,274	+		Sama_0865	0.84	-1.7
1,057,407	+				-0.3
1,057,457	+				+0.2
1,057,457	+				+1.8
1,057,458	-				+0.1
1,057,458	+				-3.2
1,057,528	+		Sama_0866	0.12	+0.7
1,057,529	-		Sama_0866	0.12	-1.4
1,057,536	+		Sama_0866	0.13	+0.4
1,057,536	+		Sama_0866	0.13	-0.1
1,057,536	+		Sama_0866	0.13	+0.5
1,057,536	+		Sama_0866	0.13	-0.6
1,057,536	+		Sama_0866	0.13	-0.3
1,057,536	+		Sama_0866	0.13	-0.8
1,057,536	+		Sama_0866	0.13	+0.6
1,057,536	+		Sama_0866	0.13	+1.1
1,057,536	+		Sama_0866	0.13	-0.9
1,057,536	+		Sama_0866	0.13	+0.6
1,057,536	+		Sama_0866	0.13	-0.3
1,057,536	+		Sama_0866	0.13	+1.0
1,057,537	-		Sama_0866	0.13	+0.1
1,057,537	-		Sama_0866	0.13	+0.5
1,057,537	-		Sama_0866	0.13	-2.5
1,057,537	-		Sama_0866	0.13	-1.2
1,057,537	-		Sama_0866	0.13	+0.4
1,057,537	-		Sama_0866	0.13	-0.1
1,057,537	-		Sama_0866	0.13	+0.1
1,057,537	-		Sama_0866	0.13	-1.1
1,057,537	-		Sama_0866	0.13	+0.4
1,057,540	+		Sama_0866	0.13	+0.0
1,057,540	+		Sama_0866	0.13	+0.2
1,057,541	-		Sama_0866	0.13	+1.1
1,057,541	-		Sama_0866	0.13	-0.3
1,057,541	-		Sama_0866	0.13	+0.7
1,057,575	-		Sama_0866	0.17	-0.1
1,057,575	-		Sama_0866	0.17	+0.4
1,057,623	-		Sama_0866	0.23	-1.3
1,057,632	-		Sama_0866	0.24	+0.1
1,057,634	+		Sama_0866	0.25	-0.2
1,057,635	-		Sama_0866	0.25	+1.0
1,057,635	-		Sama_0866	0.25	-0.4
1,057,639	+		Sama_0866	0.25	-0.3
1,057,655	+		Sama_0866	0.27	+0.1
1,057,655	+		Sama_0866	0.27	-0.0
1,057,656	-		Sama_0866	0.27	-0.5
1,057,656	-		Sama_0866	0.27	+1.1
1,057,691	-		Sama_0866	0.32	+0.4
1,057,691	-		Sama_0866	0.32	-0.5
1,057,723	+		Sama_0866	0.36	+0.1
1,057,723	+		Sama_0866	0.36	+0.4
1,057,724	-		Sama_0866	0.36	-1.6
1,057,724	-		Sama_0866	0.36	-0.8
1,057,781	+		Sama_0866	0.43	-0.8
1,057,795	+		Sama_0866	0.45	+0.8
1,057,796	-		Sama_0866	0.45	-1.2
1,057,796	-		Sama_0866	0.45	-0.2
1,057,796	-		Sama_0866	0.45	+1.9
1,057,796	-		Sama_0866	0.45	+0.8
1,057,796	-		Sama_0866	0.45	-1.7
1,057,796	-		Sama_0866	0.45	-1.7
1,057,796	-		Sama_0866	0.45	+0.5
1,057,798	-		Sama_0866	0.45	-0.7
1,057,798	-		Sama_0866	0.45	+0.1
1,057,839	+		Sama_0866	0.50	+1.1
1,057,883	+		Sama_0866	0.56	+0.5
1,057,883	+		Sama_0866	0.56	+0.8
1,057,883	+		Sama_0866	0.56	+0.8
1,057,884	-		Sama_0866	0.56	-0.3
1,057,884	-		Sama_0866	0.56	+0.8
1,057,884	-		Sama_0866	0.56	-0.0
1,057,887	+		Sama_0866	0.56	-1.7
1,057,887	+		Sama_0866	0.56	+0.7
1,057,887	+		Sama_0866	0.56	-0.5
1,057,888	-		Sama_0866	0.56	+1.4
1,057,888	-		Sama_0866	0.56	+0.9
1,057,888	-		Sama_0866	0.56	-1.7
1,057,943	+		Sama_0866	0.63	-0.7
1,057,943	+		Sama_0866	0.63	-0.8
1,057,943	+		Sama_0866	0.63	-0.5
1,057,943	+		Sama_0866	0.63	-0.7
1,057,944	-		Sama_0866	0.63	+0.1
1,057,944	-		Sama_0866	0.63	-0.3
1,057,944	-		Sama_0866	0.63	+0.1
1,057,988	-		Sama_0866	0.69	+1.5
1,057,988	-		Sama_0866	0.69	+0.8
1,058,017	+		Sama_0866	0.72	-0.5
1,058,017	+		Sama_0866	0.72	-1.1
1,058,017	+		Sama_0866	0.72	-0.0
1,058,017	+		Sama_0866	0.72	-0.0
1,058,017	+		Sama_0866	0.72	-0.3
1,058,017	+		Sama_0866	0.72	+0.1
1,058,018	-		Sama_0866	0.72	-1.1
1,058,018	-		Sama_0866	0.72	-0.6
1,058,018	-		Sama_0866	0.72	-1.5
1,058,018	-		Sama_0866	0.72	+0.2
1,058,018	-		Sama_0866	0.72	+0.9
1,058,018	-		Sama_0866	0.72	-0.7
1,058,019	+		Sama_0866	0.72	+2.1
1,058,019	+		Sama_0866	0.72	+0.4
1,058,019	+		Sama_0866	0.72	-0.3
1,058,019	+		Sama_0866	0.72	+0.1
1,058,019	+		Sama_0866	0.72	-1.1
1,058,020	-		Sama_0866	0.72	-0.2
1,058,020	-		Sama_0866	0.72	-1.4
1,058,020	-		Sama_0866	0.72	+0.2
1,058,020	-		Sama_0866	0.72	-1.2
1,058,020	-		Sama_0866	0.72	-0.3
1,058,020	-		Sama_0866	0.72	+2.9
1,058,020	-		Sama_0866	0.72	+3.1
1,058,057	+		Sama_0866	0.77	-1.7
1,058,057	+		Sama_0866	0.77	+0.1
1,058,058	-		Sama_0866	0.77	+0.2
1,058,058	-		Sama_0866	0.77	-1.4
1,058,090	-		Sama_0866	0.81	-1.2
1,058,106	-		Sama_0866	0.83	-3.1
1,058,149	+		Sama_0866	0.88	-1.1
1,058,149	+		Sama_0866	0.88	-0.8
1,058,149	+		Sama_0866	0.88	+1.7
1,058,163	+				+0.3
1,058,163	+				-1.2
1,058,209	+				-1.5
1,059,033	+				+1.1
1,059,033	+				+0.2
1,059,058	-				-1.5
1,059,112	+				+0.5
1,059,112	+				-0.3
1,059,112	+				-0.8
1,059,113	-				-0.1
1,059,113	-				+0.5
1,059,140	+				+1.1
1,059,169	-				+0.2
1,059,169	-				-1.2
1,059,169	-				+0.1
1,059,174	+				+2.7
1,059,268	+				-0.6
1,059,268	+				+1.7
1,059,268	+				-0.1
1,059,269	-				+0.6
1,059,269	-				+0.8
1,059,269	-				-2.4
1,059,269	-				-1.9
1,059,269	-				-0.9
1,059,393	+		Sama_0868	0.20	-1.2
1,059,394	-		Sama_0868	0.20	-0.2
1,059,394	-		Sama_0868	0.20	+0.5
1,059,468	+		Sama_0868	0.26	+1.1
1,059,469	-		Sama_0868	0.27	-1.0
1,059,469	-		Sama_0868	0.27	-1.2
1,059,490	+		Sama_0868	0.28	+0.1
1,059,490	+		Sama_0868	0.28	-0.7
1,059,490	+		Sama_0868	0.28	-0.7
1,059,491	-		Sama_0868	0.28	+0.6
1,059,491	-		Sama_0868	0.28	-0.6
1,059,491	-		Sama_0868	0.28	+2.7
1,059,573	+		Sama_0868	0.35	-0.2
1,059,574	-		Sama_0868	0.35	-0.8
1,059,576	+		Sama_0868	0.36	-1.2
1,059,576	+		Sama_0868	0.36	-0.3
1,059,576	+		Sama_0868	0.36	+0.9
1,059,617	+		Sama_0868	0.39	-3.1
1,059,679	+		Sama_0868	0.44	-0.5
1,059,679	+		Sama_0868	0.44	-0.2
1,059,680	-		Sama_0868	0.44	-2.2
1,059,692	+		Sama_0868	0.45	+1.5
1,059,692	+		Sama_0868	0.45	+1.6
1,059,692	+		Sama_0868	0.45	-1.4
1,059,692	+		Sama_0868	0.45	+0.4
1,059,693	-		Sama_0868	0.46	+0.3
1,059,693	-		Sama_0868	0.46	-0.3
1,059,693	-		Sama_0868	0.46	-0.5
1,059,696	+		Sama_0868	0.46	-1.1
1,059,696	+		Sama_0868	0.46	+1.8
1,059,696	+		Sama_0868	0.46	+0.5
1,059,696	+		Sama_0868	0.46	-0.2
1,059,696	+		Sama_0868	0.46	-0.4
1,059,696	+		Sama_0868	0.46	+0.8
1,059,697	-		Sama_0868	0.46	-1.2
1,059,697	-		Sama_0868	0.46	-0.2
1,059,697	-		Sama_0868	0.46	-0.4
1,059,747	+		Sama_0868	0.50	+0.2
1,059,747	+		Sama_0868	0.50	+0.6
1,059,747	+		Sama_0868	0.50	+0.2
1,059,747	+		Sama_0868	0.50	-1.7
1,059,748	-		Sama_0868	0.50	+1.3
1,059,753	+		Sama_0868	0.51	-0.8
1,059,762	+		Sama_0868	0.51	+0.9
1,059,762	+		Sama_0868	0.51	-0.2
1,059,762	+		Sama_0868	0.51	+0.5
1,059,762	+		Sama_0868	0.51	+3.3
1,059,797	+		Sama_0868	0.54	+0.8
1,059,797	+		Sama_0868	0.54	+2.1
1,059,797	+		Sama_0868	0.54	-1.7
1,059,797	+		Sama_0868	0.54	+0.2
1,059,797	+		Sama_0868	0.54	-0.2
1,059,798	-		Sama_0868	0.55	-1.6
1,059,798	-		Sama_0868	0.55	-0.3
1,059,798	-		Sama_0868	0.55	-2.7
1,059,798	-		Sama_0868	0.55	-1.5
1,059,798	-		Sama_0868	0.55	-0.2
1,059,798	-		Sama_0868	0.55	-1.9
1,059,865	-		Sama_0868	0.60	-1.1
1,059,933	+		Sama_0868	0.66	+2.1
1,059,933	+		Sama_0868	0.66	+0.8
1,059,934	-		Sama_0868	0.66	+0.0
1,059,934	-		Sama_0868	0.66	+1.0
1,059,934	-		Sama_0868	0.66	+1.4
1,060,007	+		Sama_0868	0.72	-0.4
1,060,007	+		Sama_0868	0.72	+1.1
1,060,007	+		Sama_0868	0.72	+0.2
1,060,007	+		Sama_0868	0.72	-0.6
1,060,007	+		Sama_0868	0.72	+0.1
1,060,007	+		Sama_0868	0.72	-0.9
1,060,007	+		Sama_0868	0.72	-1.5
1,060,007	+		Sama_0868	0.72	-1.3
1,060,008	-		Sama_0868	0.72	-2.2
1,060,008	-		Sama_0868	0.72	-1.7
1,060,008	-		Sama_0868	0.72	-0.1
1,060,008	-		Sama_0868	0.72	-0.1
1,060,008	-		Sama_0868	0.72	+0.6
1,060,008	-		Sama_0868	0.72	-0.5
1,060,008	-		Sama_0868	0.72	+0.1
1,060,029	+		Sama_0868	0.74	-0.0