Strain Fitness in Shewanella oneidensis MR-1 around SOA0059

Experiment: Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum chloride 1 mM
48,312	+				+0.1
48,334	+				-0.3
48,334	+				+0.1
48,334	+				+0.2
48,341	-				+0.5
48,358	+				-0.1
48,461	+				-0.4
48,713	+				-0.9
48,744	+				-1.2
48,774	-		SOA0059	0.13	-0.2
48,774	-		SOA0059	0.13	-1.7
48,927	+		SOA0059	0.65	-2.6
48,935	-		SOA0059	0.68	-0.4
49,000	-				-0.7
49,035	+				+0.4
49,043	-				+0.5
49,049	-				-0.3
49,052	-				-0.5
49,061	-				-0.1
49,063	+				+0.5
49,173	+		SOA0060	0.27	+0.1
49,174	+		SOA0060	0.27	+0.1
49,174	+		SOA0060	0.27	-0.1
49,174	+		SOA0060	0.27	-0.7
49,184	+		SOA0060	0.29	+0.0
49,196	+		SOA0060	0.31	+0.7
49,196	+		SOA0060	0.31	-0.3
49,202	+		SOA0060	0.32	+0.4
49,202	+		SOA0060	0.32	-0.2
49,203	-		SOA0060	0.33	+0.9
49,203	-		SOA0060	0.33	+0.0
49,203	-		SOA0060	0.33	+0.2
49,211	-		SOA0060	0.34	+0.1
49,237	+		SOA0060	0.39	-0.2
49,239	+		SOA0060	0.39	+0.1
49,265	+		SOA0060	0.44	-0.5
49,273	-		SOA0060	0.46	+0.3
49,297	-		SOA0060	0.50	-0.4
49,379	+		SOA0060	0.66	-0.9
49,379	+		SOA0060	0.66	-0.2
49,379	+		SOA0060	0.66	-0.3
49,379	+		SOA0060	0.66	-0.8
49,387	-		SOA0060	0.67	+0.0
49,387	-		SOA0060	0.67	-0.1
49,409	+		SOA0060	0.72	+0.0
49,410	-		SOA0060	0.72	+0.1
49,429	+		SOA0060	0.75	-0.6
49,429	+		SOA0060	0.75	+0.3
49,429	+		SOA0060	0.75	+0.4
49,429	+		SOA0060	0.75	+0.6
49,429	+		SOA0060	0.75	-0.2
49,430	-		SOA0060	0.76	+1.2
49,432	-		SOA0060	0.76	+0.0
49,437	-		SOA0060	0.77	+0.2
49,437	-		SOA0060	0.77	-0.4
49,462	-		SOA0060	0.82	+0.4
49,462	-		SOA0060	0.82	+0.6
49,493	+		SOA0060	0.88	+0.3
49,493	+		SOA0060	0.88	-0.6
49,505	+		SOA0060	0.90	+0.2
49,556	-				+0.7
49,557	+				-0.1
49,565	-				-0.8
49,565	-				+0.8
49,579	+				-1.1
49,621	+				+0.7
49,621	+				+0.8
49,621	+				+0.1
49,621	+				-0.6
49,629	+				+0.1
49,768	+				-0.0
49,768	+				-0.0
49,768	+				-1.1
49,776	-				+0.7
49,776	-				+0.3
49,776	-				+0.5
49,776	-				+0.2
49,776	-				-0.3
49,776	-				+0.7
49,776	-				+0.3
49,782	-				+0.1
49,801	+				+0.9
49,801	+				-0.6
49,869	-		SOA0061	0.18	+0.0
49,880	-		SOA0061	0.20	-0.0
49,882	+		SOA0061	0.20	+0.3
49,882	+		SOA0061	0.20	+0.1
49,882	+		SOA0061	0.20	+0.9
49,953	+		SOA0061	0.30	-0.6
49,958	+		SOA0061	0.31	+0.5
49,958	+		SOA0061	0.31	+0.2
49,958	+		SOA0061	0.31	+0.5
49,958	+		SOA0061	0.31	+0.8
49,958	+		SOA0061	0.31	-1.3
49,958	+		SOA0061	0.31	+1.7
49,966	-		SOA0061	0.32	-0.1