Strain Fitness in Shewanella oneidensis MR-1 around SO4688

Experiment: Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum chloride 1 mM
4,886,583	+	ugd	SO4687	0.44	-3.3
4,886,583	+	ugd	SO4687	0.44	-2.3
4,886,583	+	ugd	SO4687	0.44	-3.0
4,886,585	+	ugd	SO4687	0.44	-1.7
4,886,591	-	ugd	SO4687	0.45	-2.4
4,886,599	-	ugd	SO4687	0.45	-4.4
4,886,601	-	ugd	SO4687	0.46	-2.4
4,886,609	-	ugd	SO4687	0.46	-3.0
4,886,739	-	ugd	SO4687	0.57	-2.4
4,886,774	+	ugd	SO4687	0.60	-2.9
4,886,774	+	ugd	SO4687	0.60	-1.4
4,886,774	+	ugd	SO4687	0.60	-2.0
4,886,783	-	ugd	SO4687	0.61	-2.4
4,886,793	+	ugd	SO4687	0.62	-3.3
4,886,867	+	ugd	SO4687	0.68	-3.0
4,887,054	+	ugd	SO4687	0.84	-3.1
4,887,054	+	ugd	SO4687	0.84	-3.1
4,887,203	+				-2.4
4,887,217	+				-3.4
4,887,246	+				-2.2
4,887,261	+				-3.6
4,887,469	-				-2.4
4,887,541	+				-2.3
4,887,541	+				-2.2
4,887,544	-		SO4688	0.10	-2.7
4,887,544	-		SO4688	0.10	-2.3
4,887,549	-		SO4688	0.11	-2.3
4,887,551	+		SO4688	0.11	-2.6
4,887,551	+		SO4688	0.11	-2.7
4,887,559	-		SO4688	0.12	-2.8
4,887,602	-		SO4688	0.18	-2.6
4,887,623	+		SO4688	0.21	-3.0
4,887,664	-		SO4688	0.27	-1.7
4,887,666	+		SO4688	0.27	-2.8
4,887,671	+		SO4688	0.28	-2.0
4,887,671	+		SO4688	0.28	-2.6
4,887,671	+		SO4688	0.28	-2.4
4,887,671	+		SO4688	0.28	-2.4
4,887,674	-		SO4688	0.28	-2.2
4,887,674	-		SO4688	0.28	+0.5
4,887,676	+		SO4688	0.28	-2.6
4,887,676	+		SO4688	0.28	-2.6
4,887,676	+		SO4688	0.28	-2.4
4,887,676	+		SO4688	0.28	-4.2
4,887,679	-		SO4688	0.29	-2.0
4,887,679	-		SO4688	0.29	-2.3
4,887,679	-		SO4688	0.29	-3.4
4,887,679	-		SO4688	0.29	-1.9
4,887,684	-		SO4688	0.29	-2.6
4,887,684	-		SO4688	0.29	-2.2
4,887,684	-		SO4688	0.29	-1.4
4,887,684	-		SO4688	0.29	-2.0
4,887,701	-		SO4688	0.32	-2.2
4,887,701	-		SO4688	0.32	-2.3
4,887,748	+		SO4688	0.38	-1.8
4,887,801	-		SO4688	0.45	-2.3
4,887,903	+		SO4688	0.59	-1.3
4,887,909	-		SO4688	0.60	-3.3
4,887,935	+		SO4688	0.64	-2.3
4,887,935	+		SO4688	0.64	-1.9
4,887,952	+		SO4688	0.66	-1.9
4,887,961	+		SO4688	0.67	-3.8
4,888,075	-		SO4688	0.83	-2.3
4,888,138	-				-2.8
4,888,139	+				-1.3
4,888,196	+				+0.7
4,888,213	+				-3.0
4,888,247	+				-2.5
4,888,284	-		SO4689	0.12	-3.2
4,888,416	+		SO4689	0.32	-3.8
4,888,417	-		SO4689	0.33	-3.3
4,888,432	+		SO4689	0.35	-3.2
4,888,432	+		SO4689	0.35	-1.4
4,888,486	+		SO4689	0.43	-2.4
4,888,494	-		SO4689	0.44	-3.0
4,888,494	-		SO4689	0.44	-3.8
4,888,513	+		SO4689	0.47	-0.6
4,888,701	-		SO4689	0.76	-1.7
4,888,773	+		SO4689	0.87	-3.7
4,888,821	+				-0.9
4,888,829	-				-2.3
4,888,829	-				-2.9
4,888,829	-				-3.4
4,888,829	-				-2.1
4,888,829	-				-1.5
4,888,829	-				-2.8
4,888,829	-				-1.6
4,888,829	-				-2.9
4,889,102	+				-1.9
4,889,175	-				-3.6