Experiment: Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt cheW-3 and SO3203 are separated by 7 nucleotides SO3203 and SO3204 overlap by 17 nucleotides SO3204 and SO3205 are separated by 62 nucleotides SO3205 and cheB-3 overlap by 8 nucleotides
SO3202: cheW-3 - purine-binding chemotaxis protein CheW (NCBI ptt file), at 3,342,684 to 3,343,178
cheW-3
SO3203: SO3203 - CheW domain protein (NCBI ptt file), at 3,343,186 to 3,344,166
SO3203
SO3204: SO3204 - ParA family protein (NCBI ptt file), at 3,344,150 to 3,344,941
SO3204
SO3205: SO3205 - hypothetical protein (NCBI ptt file), at 3,345,004 to 3,345,543
SO3205
SO3206: cheB-3 - protein-glutamate methylesterase CheB (NCBI ptt file), at 3,345,536 to 3,346,660
cheB-3
Position (kb)
3344
3345 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3343.161 kb on - strand at 3343.215 kb on - strand at 3343.561 kb on - strand, within SO3203 at 3343.594 kb on + strand, within SO3203 at 3343.750 kb on - strand, within SO3203 at 3344.090 kb on + strand at 3344.271 kb on + strand, within SO3204 at 3344.339 kb on - strand, within SO3204 at 3344.446 kb on + strand, within SO3204 at 3344.543 kb on + strand, within SO3204 at 3344.615 kb on + strand, within SO3204 at 3344.641 kb on - strand, within SO3204 at 3344.715 kb on + strand, within SO3204 at 3344.782 kb on + strand, within SO3204 at 3344.935 kb on - strand at 3344.936 kb on - strand at 3345.004 kb on - strand at 3345.010 kb on - strand at 3345.035 kb on - strand at 3345.038 kb on + strand at 3345.058 kb on - strand, within SO3205 at 3345.258 kb on + strand, within SO3205 at 3345.266 kb on - strand, within SO3205 at 3345.266 kb on - strand, within SO3205 at 3345.266 kb on - strand, within SO3205 at 3345.350 kb on + strand, within SO3205 at 3345.350 kb on + strand, within SO3205 at 3345.408 kb on - strand, within SO3205 at 3345.528 kb on - strand at 3345.764 kb on - strand, within cheB-3 at 3345.800 kb on - strand, within cheB-3 at 3345.840 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 1 mM remove 3,343,161 - -0.4 3,343,215 - +0.4 3,343,561 - SO3203 0.38 -0.2 3,343,594 + SO3203 0.42 +0.0 3,343,750 - SO3203 0.57 -0.8 3,344,090 + -0.7 3,344,271 + SO3204 0.15 -0.2 3,344,339 - SO3204 0.24 +0.4 3,344,446 + SO3204 0.37 +0.3 3,344,543 + SO3204 0.50 +0.2 3,344,615 + SO3204 0.59 +0.2 3,344,641 - SO3204 0.62 +0.3 3,344,715 + SO3204 0.71 +0.8 3,344,782 + SO3204 0.80 +0.7 3,344,935 - +0.3 3,344,936 - +0.8 3,345,004 - -0.6 3,345,010 - +0.1 3,345,035 - -0.1 3,345,038 + -0.8 3,345,058 - SO3205 0.10 +0.1 3,345,258 + SO3205 0.47 -0.7 3,345,266 - SO3205 0.49 +1.0 3,345,266 - SO3205 0.49 +0.6 3,345,266 - SO3205 0.49 +0.4 3,345,350 + SO3205 0.64 -0.4 3,345,350 + SO3205 0.64 +0.4 3,345,408 - SO3205 0.75 +0.2 3,345,528 - +0.6 3,345,764 - cheB-3 SO3206 0.20 +0.7 3,345,800 - cheB-3 SO3206 0.23 +0.7 3,345,840 - +3.4
Or see this region's nucleotide sequence