Strain Fitness in Shewanella oneidensis MR-1 around SO3030

Experiment: Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum chloride 1 mM
3,139,131	+				-0.8
3,139,131	-				+0.6
3,139,131	-				-0.7
3,139,160	-				-0.8
3,139,310	-		SO3029	0.58	+0.0
3,139,599	-				-1.4
3,139,766	-				-2.3
3,139,910	-				-2.6
3,139,948	-				-2.4
3,139,950	-				-2.4
3,140,000	+				-1.9
3,140,060	+				-3.2
3,140,076	+				-2.2
3,140,084	-				-3.4
3,140,095	+				-3.1
3,140,111	+				-3.0
3,140,160	+	alcA	SO3030	0.10	-2.0
3,140,276	+	alcA	SO3030	0.18	-2.6
3,140,284	-	alcA	SO3030	0.19	-0.6
3,140,448	+	alcA	SO3030	0.30	-2.4
3,140,456	+	alcA	SO3030	0.30	-2.3
3,140,626	-	alcA	SO3030	0.41	-3.9
3,140,813	+	alcA	SO3030	0.54	-2.2
3,140,912	+	alcA	SO3030	0.61	-2.3
3,140,980	+	alcA	SO3030	0.65	-2.3
3,141,031	-	alcA	SO3030	0.68	-1.6
3,141,191	-	alcA	SO3030	0.79	-3.4
3,141,250	-	alcA	SO3030	0.83	-2.2
3,141,577	+		SO3031	0.12	-4.0
3,141,577	+		SO3031	0.12	-2.5
3,141,769	-		SO3031	0.43	-2.0
3,141,820	+		SO3031	0.51	-3.2
3,142,116	+				-1.9
3,142,330	+				-2.9
3,142,376	+				-2.1