Strain Fitness in Shewanella oneidensis MR-1 around SO1462

Experiment: Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum chloride 1 mM
1,522,843	+		SO1461	0.77	+0.4
1,522,843	+		SO1461	0.77	-0.8
1,522,850	+		SO1461	0.77	-0.8
1,522,850	+		SO1461	0.77	-0.1
1,522,858	-		SO1461	0.77	+1.1
1,522,858	-		SO1461	0.77	-0.5
1,522,938	+		SO1461	0.79	-0.4
1,522,945	-		SO1461	0.79	+0.2
1,522,979	+		SO1461	0.80	+0.1
1,523,015	+		SO1461	0.81	-0.6
1,523,023	-		SO1461	0.81	-0.2
1,523,023	-		SO1461	0.81	-0.6
1,523,125	+		SO1461	0.84	+1.0
1,523,125	+		SO1461	0.84	-0.6
1,523,144	+		SO1461	0.84	-0.2
1,523,144	+		SO1461	0.84	+0.0
1,523,144	+		SO1461	0.84	-0.7
1,523,182	-		SO1461	0.85	+0.0
1,523,182	-		SO1461	0.85	-1.2
1,523,218	-		SO1461	0.86	-0.6
1,523,222	-		SO1461	0.86	-0.9
1,523,248	+		SO1461	0.87	+0.1
1,523,250	+		SO1461	0.87	-0.7
1,523,407	+				-0.3
1,523,408	+				+0.1
1,523,497	-				+0.0
1,523,572	+				-0.2
1,523,613	-				-0.3
1,523,613	-				+0.5
1,523,613	-				-0.2
1,523,613	-				-0.3
1,523,758	+				-0.1
1,523,760	+				+1.7
1,523,773	-				-0.3
1,523,787	+				-0.9
1,523,801	-				-0.5
1,523,884	-				+0.0
1,523,899	+				-0.5
1,523,940	-				-1.5
1,523,955	-				+0.1
1,523,965	-		SO1462	0.10	-0.7
1,524,264	+		SO1462	0.28	-0.4
1,524,277	+		SO1462	0.29	-0.0
1,524,310	+		SO1462	0.31	-0.1
1,524,310	+		SO1462	0.31	-1.1
1,524,318	-		SO1462	0.32	+0.5
1,524,318	-		SO1462	0.32	+0.3
1,524,318	-		SO1462	0.32	-0.2
1,524,404	-		SO1462	0.37	+0.6
1,524,433	+		SO1462	0.39	-1.1
1,524,489	+		SO1462	0.42	-1.0
1,524,490	-		SO1462	0.42	-0.3
1,524,527	+		SO1462	0.44	-0.6
1,524,529	-		SO1462	0.45	-0.4
1,524,542	+		SO1462	0.45	-0.3
1,524,548	+		SO1462	0.46	-0.9
1,524,624	-		SO1462	0.50	-0.3
1,524,673	-		SO1462	0.53	-0.3
1,524,726	+		SO1462	0.56	-0.7
1,524,822	+		SO1462	0.62	+0.1
1,524,859	-		SO1462	0.65	-0.2
1,524,874	+		SO1462	0.65	+0.5
1,524,917	+		SO1462	0.68	-0.4
1,524,940	+		SO1462	0.69	+0.5
1,524,948	-		SO1462	0.70	-0.4
1,525,000	+		SO1462	0.73	-1.5
1,525,094	+		SO1462	0.79	-0.2
1,525,145	+		SO1462	0.82	+0.3
1,525,204	-		SO1462	0.85	+0.2
1,525,257	-		SO1462	0.89	-0.3
1,525,297	+				-0.7
1,525,366	+				+0.1
1,525,420	-				-0.6
1,525,485	+				-0.2
1,525,536	+				-0.3
1,525,566	+				-0.3
1,525,588	+				-0.7
1,525,620	+				-0.2
1,525,682	-				-0.7
1,525,698	+				+1.0
1,525,846	+				-0.3
1,525,956	+		SO1463	0.11	-0.5
1,525,963	+		SO1463	0.12	-0.1
1,525,971	+		SO1463	0.12	-0.3
1,526,259	+		SO1463	0.18	+0.3
1,526,267	-		SO1463	0.18	-0.3
1,526,413	-		SO1463	0.22	-1.2