Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_799 and HP15_800 overlap by 1 nucleotides HP15_800 and HP15_802 are separated by 6 nucleotides HP15_802 and HP15_801 are separated by 141 nucleotides HP15_801 and HP15_803 are separated by 26 nucleotides
HP15_799: HP15_799 - undecaprenyl pyrophosphate phosphatase-like protein, at 814,173 to 814,535
_799
HP15_800: HP15_800 - protein YhiQ, at 814,535 to 815,374
_800
HP15_802: HP15_802 - glycerol-3-phosphate acyltransferase, at 815,381 to 817,849
_802
HP15_801: HP15_801 - NADH pyrophosphatase, at 817,991 to 818,818
_801
HP15_803: HP15_803 - glutamate racemase, at 818,845 to 819,678
_803
Position (kb) 815
816
817
818 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 814.430 kb on - strand, within HP15_799 at 814.570 kb on + strand at 814.623 kb on - strand, within HP15_800 at 814.714 kb on - strand, within HP15_800 at 814.739 kb on - strand, within HP15_800 at 814.888 kb on - strand, within HP15_800 at 814.919 kb on + strand, within HP15_800 at 814.947 kb on + strand, within HP15_800 at 814.947 kb on + strand, within HP15_800 at 814.955 kb on - strand, within HP15_800 at 814.991 kb on + strand, within HP15_800 at 815.020 kb on - strand, within HP15_800 at 815.062 kb on + strand, within HP15_800 at 815.342 kb on + strand at 815.429 kb on + strand at 815.435 kb on - strand at 815.473 kb on + strand at 815.481 kb on - strand at 815.491 kb on - strand at 815.491 kb on - strand at 815.522 kb on - strand at 815.546 kb on + strand at 815.675 kb on + strand, within HP15_802 at 815.720 kb on + strand, within HP15_802 at 815.735 kb on - strand, within HP15_802 at 815.899 kb on - strand, within HP15_802 at 815.899 kb on - strand, within HP15_802 at 815.906 kb on + strand, within HP15_802 at 815.972 kb on + strand, within HP15_802 at 816.131 kb on - strand, within HP15_802 at 816.141 kb on - strand, within HP15_802 at 816.167 kb on - strand, within HP15_802 at 816.167 kb on - strand, within HP15_802 at 816.167 kb on - strand, within HP15_802 at 816.305 kb on - strand, within HP15_802 at 816.324 kb on + strand, within HP15_802 at 816.476 kb on - strand, within HP15_802 at 816.476 kb on - strand, within HP15_802 at 816.476 kb on - strand, within HP15_802 at 816.571 kb on - strand, within HP15_802 at 816.592 kb on - strand, within HP15_802 at 816.593 kb on - strand, within HP15_802 at 816.696 kb on + strand, within HP15_802 at 816.887 kb on + strand, within HP15_802 at 816.936 kb on + strand, within HP15_802 at 816.944 kb on - strand, within HP15_802 at 817.011 kb on + strand, within HP15_802 at 817.019 kb on + strand, within HP15_802 at 817.174 kb on - strand, within HP15_802 at 817.178 kb on + strand, within HP15_802 at 817.196 kb on + strand, within HP15_802 at 817.260 kb on + strand, within HP15_802 at 817.268 kb on - strand, within HP15_802 at 817.469 kb on + strand, within HP15_802 at 817.651 kb on + strand at 817.678 kb on + strand at 817.730 kb on + strand at 817.779 kb on - strand at 817.900 kb on - strand at 818.208 kb on - strand, within HP15_801 at 818.567 kb on + strand, within HP15_801
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 814,430 - HP15_799 0.71 +0.5 814,570 + +0.3 814,623 - HP15_800 0.10 +0.2 814,714 - HP15_800 0.21 -1.1 814,739 - HP15_800 0.24 +1.1 814,888 - HP15_800 0.42 -1.3 814,919 + HP15_800 0.46 -1.6 814,947 + HP15_800 0.49 -1.0 814,947 + HP15_800 0.49 +0.2 814,955 - HP15_800 0.50 -1.6 814,991 + HP15_800 0.54 -0.3 815,020 - HP15_800 0.58 -1.1 815,062 + HP15_800 0.63 +0.4 815,342 + -0.7 815,429 + -0.3 815,435 - -0.3 815,473 + -0.3 815,481 - -0.3 815,491 - -0.1 815,491 - +0.2 815,522 - +1.0 815,546 + +0.9 815,675 + HP15_802 0.12 +0.3 815,720 + HP15_802 0.14 +0.9 815,735 - HP15_802 0.14 +0.8 815,899 - HP15_802 0.21 +0.2 815,899 - HP15_802 0.21 +0.6 815,906 + HP15_802 0.21 +0.4 815,972 + HP15_802 0.24 -0.0 816,131 - HP15_802 0.30 +0.7 816,141 - HP15_802 0.31 +0.7 816,167 - HP15_802 0.32 +2.4 816,167 - HP15_802 0.32 -0.1 816,167 - HP15_802 0.32 -1.1 816,305 - HP15_802 0.37 -0.5 816,324 + HP15_802 0.38 +1.5 816,476 - HP15_802 0.44 +0.2 816,476 - HP15_802 0.44 +0.1 816,476 - HP15_802 0.44 -1.0 816,571 - HP15_802 0.48 -2.4 816,592 - HP15_802 0.49 +0.1 816,593 - HP15_802 0.49 -0.7 816,696 + HP15_802 0.53 -3.3 816,887 + HP15_802 0.61 +0.6 816,936 + HP15_802 0.63 -0.1 816,944 - HP15_802 0.63 -0.0 817,011 + HP15_802 0.66 -2.5 817,019 + HP15_802 0.66 +0.6 817,174 - HP15_802 0.73 +0.3 817,178 + HP15_802 0.73 -1.4 817,196 + HP15_802 0.74 +0.7 817,260 + HP15_802 0.76 +1.3 817,268 - HP15_802 0.76 +0.3 817,469 + HP15_802 0.85 -0.1 817,651 + +0.5 817,678 + +0.6 817,730 + -0.0 817,779 - -0.7 817,900 - +0.9 818,208 - HP15_801 0.26 +2.0 818,567 + HP15_801 0.70 +0.1
Or see this region's nucleotide sequence