Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_642 and HP15_643 are separated by 80 nucleotides HP15_643 and HP15_644 are separated by 304 nucleotides HP15_644 and HP15_645 are separated by 355 nucleotides
HP15_642: HP15_642 - membrane protein, at 666,319 to 666,579
_642
HP15_643: HP15_643 - transmembrane pair domain protein, at 666,660 to 667,094
_643
HP15_644: HP15_644 - conserved hypothetical protein, secreted, at 667,399 to 668,142
_644
HP15_645: HP15_645 - conserved hypothetical protein, at 668,498 to 669,187
_645
Position (kb) 667
668
669 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 666.522 kb on + strand, within HP15_642 at 666.739 kb on + strand, within HP15_643 at 666.914 kb on + strand, within HP15_643 at 666.947 kb on - strand, within HP15_643 at 666.968 kb on - strand, within HP15_643 at 667.008 kb on + strand, within HP15_643 at 667.034 kb on + strand, within HP15_643 at 667.057 kb on - strand at 667.143 kb on + strand at 667.143 kb on + strand at 667.151 kb on - strand at 667.151 kb on - strand at 667.220 kb on + strand at 667.259 kb on - strand at 667.321 kb on + strand at 667.371 kb on - strand at 667.381 kb on - strand at 667.710 kb on + strand, within HP15_644 at 667.761 kb on - strand, within HP15_644 at 667.761 kb on - strand, within HP15_644 at 667.768 kb on + strand, within HP15_644 at 667.793 kb on + strand, within HP15_644 at 667.844 kb on + strand, within HP15_644 at 667.880 kb on - strand, within HP15_644 at 667.973 kb on - strand, within HP15_644 at 667.999 kb on - strand, within HP15_644 at 668.021 kb on + strand, within HP15_644 at 668.021 kb on + strand, within HP15_644 at 668.028 kb on + strand, within HP15_644 at 668.028 kb on + strand, within HP15_644 at 668.028 kb on + strand, within HP15_644 at 668.029 kb on - strand, within HP15_644 at 668.029 kb on - strand, within HP15_644 at 668.029 kb on - strand, within HP15_644 at 668.029 kb on - strand, within HP15_644 at 668.029 kb on - strand, within HP15_644 at 668.249 kb on + strand at 668.249 kb on + strand at 668.283 kb on + strand at 668.462 kb on - strand at 668.565 kb on + strand at 668.565 kb on + strand at 668.573 kb on - strand, within HP15_645 at 668.679 kb on + strand, within HP15_645 at 668.684 kb on + strand, within HP15_645 at 668.694 kb on + strand, within HP15_645 at 668.724 kb on - strand, within HP15_645 at 668.767 kb on - strand, within HP15_645 at 668.767 kb on - strand, within HP15_645 at 668.767 kb on - strand, within HP15_645 at 668.767 kb on - strand, within HP15_645 at 668.860 kb on - strand, within HP15_645 at 668.860 kb on - strand, within HP15_645 at 669.023 kb on + strand, within HP15_645
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 666,522 + HP15_642 0.78 +0.8 666,739 + HP15_643 0.18 +0.1 666,914 + HP15_643 0.58 +1.8 666,947 - HP15_643 0.66 +0.1 666,968 - HP15_643 0.71 -0.2 667,008 + HP15_643 0.80 +0.2 667,034 + HP15_643 0.86 -1.7 667,057 - +0.6 667,143 + +0.4 667,143 + -0.6 667,151 - -0.4 667,151 - -0.2 667,220 + +0.1 667,259 - -1.4 667,321 + +0.5 667,371 - +0.2 667,381 - +0.1 667,710 + HP15_644 0.42 -0.6 667,761 - HP15_644 0.49 +0.8 667,761 - HP15_644 0.49 +0.2 667,768 + HP15_644 0.50 -0.1 667,793 + HP15_644 0.53 +1.2 667,844 + HP15_644 0.60 -0.2 667,880 - HP15_644 0.65 -0.9 667,973 - HP15_644 0.77 -0.1 667,999 - HP15_644 0.81 +0.9 668,021 + HP15_644 0.84 -0.0 668,021 + HP15_644 0.84 -1.1 668,028 + HP15_644 0.85 -0.9 668,028 + HP15_644 0.85 -0.7 668,028 + HP15_644 0.85 -3.2 668,029 - HP15_644 0.85 +0.4 668,029 - HP15_644 0.85 -2.4 668,029 - HP15_644 0.85 -0.1 668,029 - HP15_644 0.85 -0.5 668,029 - HP15_644 0.85 -0.7 668,249 + -2.8 668,249 + -0.3 668,283 + -0.4 668,462 - +0.3 668,565 + +0.6 668,565 + -0.3 668,573 - HP15_645 0.11 -0.5 668,679 + HP15_645 0.26 -0.5 668,684 + HP15_645 0.27 +0.3 668,694 + HP15_645 0.28 -1.3 668,724 - HP15_645 0.33 -0.8 668,767 - HP15_645 0.39 -0.2 668,767 - HP15_645 0.39 +0.1 668,767 - HP15_645 0.39 +0.2 668,767 - HP15_645 0.39 -2.2 668,860 - HP15_645 0.52 -0.3 668,860 - HP15_645 0.52 +1.2 669,023 + HP15_645 0.76 +0.3
Or see this region's nucleotide sequence