Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4283 and Psest_4284 are separated by 264 nucleotides Psest_4284 and Psest_4285 are separated by 219 nucleotides
Psest_4283: Psest_4283 - Spermidine/putrescine-binding periplasmic protein, at 4,474,418 to 4,475,503
_4283
Psest_4284: Psest_4284 - Spermidine/putrescine-binding periplasmic protein, at 4,475,768 to 4,476,865
_4284
Psest_4285: Psest_4285 - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, at 4,477,085 to 4,478,443
_4285
Position (kb)
4475
4476
4477 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4474.820 kb on - strand, within Psest_4283 at 4474.845 kb on + strand, within Psest_4283 at 4474.845 kb on + strand, within Psest_4283 at 4474.846 kb on - strand, within Psest_4283 at 4474.846 kb on - strand, within Psest_4283 at 4474.863 kb on + strand, within Psest_4283 at 4474.864 kb on - strand, within Psest_4283 at 4474.950 kb on + strand, within Psest_4283 at 4474.950 kb on + strand, within Psest_4283 at 4474.950 kb on + strand, within Psest_4283 at 4474.951 kb on - strand, within Psest_4283 at 4474.951 kb on - strand, within Psest_4283 at 4474.951 kb on - strand, within Psest_4283 at 4475.100 kb on + strand, within Psest_4283 at 4475.100 kb on + strand, within Psest_4283 at 4475.128 kb on - strand, within Psest_4283 at 4475.406 kb on + strand at 4475.406 kb on + strand at 4475.406 kb on + strand at 4475.407 kb on - strand at 4475.407 kb on - strand at 4475.407 kb on - strand at 4475.407 kb on - strand at 4475.421 kb on + strand at 4475.421 kb on + strand at 4475.421 kb on + strand at 4475.421 kb on + strand at 4475.421 kb on + strand at 4475.421 kb on + strand at 4475.421 kb on + strand at 4475.421 kb on + strand at 4475.421 kb on + strand at 4475.421 kb on + strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.422 kb on - strand at 4475.731 kb on + strand at 4475.844 kb on + strand at 4475.844 kb on + strand at 4475.844 kb on + strand at 4475.845 kb on - strand at 4475.875 kb on - strand at 4475.875 kb on - strand at 4475.875 kb on - strand at 4475.949 kb on + strand, within Psest_4284 at 4475.949 kb on + strand, within Psest_4284 at 4475.949 kb on + strand, within Psest_4284 at 4475.949 kb on + strand, within Psest_4284 at 4475.949 kb on + strand, within Psest_4284 at 4475.949 kb on + strand, within Psest_4284 at 4475.949 kb on + strand, within Psest_4284 at 4475.949 kb on + strand, within Psest_4284 at 4475.949 kb on + strand, within Psest_4284 at 4475.949 kb on + strand, within Psest_4284 at 4475.949 kb on + strand, within Psest_4284 at 4475.949 kb on + strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.950 kb on - strand, within Psest_4284 at 4475.988 kb on + strand, within Psest_4284 at 4475.988 kb on + strand, within Psest_4284 at 4475.988 kb on + strand, within Psest_4284 at 4475.988 kb on + strand, within Psest_4284 at 4475.989 kb on - strand, within Psest_4284 at 4475.989 kb on - strand, within Psest_4284 at 4475.989 kb on - strand, within Psest_4284 at 4475.989 kb on - strand, within Psest_4284 at 4475.989 kb on - strand, within Psest_4284 at 4476.135 kb on + strand, within Psest_4284 at 4476.135 kb on + strand, within Psest_4284 at 4476.135 kb on + strand, within Psest_4284 at 4476.135 kb on + strand, within Psest_4284 at 4476.135 kb on + strand, within Psest_4284 at 4476.135 kb on + strand, within Psest_4284 at 4476.135 kb on + strand, within Psest_4284 at 4476.135 kb on + strand, within Psest_4284 at 4476.135 kb on + strand, within Psest_4284 at 4476.136 kb on - strand, within Psest_4284 at 4476.136 kb on - strand, within Psest_4284 at 4476.136 kb on - strand, within Psest_4284 at 4476.136 kb on - strand, within Psest_4284 at 4476.136 kb on - strand, within Psest_4284 at 4476.195 kb on + strand, within Psest_4284 at 4476.195 kb on + strand, within Psest_4284 at 4476.195 kb on + strand, within Psest_4284 at 4476.195 kb on + strand, within Psest_4284 at 4476.195 kb on + strand, within Psest_4284 at 4476.195 kb on + strand, within Psest_4284 at 4476.195 kb on + strand, within Psest_4284 at 4476.196 kb on - strand, within Psest_4284 at 4476.196 kb on - strand, within Psest_4284 at 4476.196 kb on - strand, within Psest_4284 at 4476.196 kb on - strand, within Psest_4284 at 4476.196 kb on - strand, within Psest_4284 at 4476.196 kb on - strand, within Psest_4284 at 4476.196 kb on - strand, within Psest_4284 at 4476.300 kb on + strand, within Psest_4284 at 4476.301 kb on - strand, within Psest_4284 at 4476.301 kb on - strand, within Psest_4284 at 4476.453 kb on + strand, within Psest_4284 at 4476.480 kb on + strand, within Psest_4284 at 4476.480 kb on + strand, within Psest_4284 at 4476.481 kb on - strand, within Psest_4284 at 4476.702 kb on + strand, within Psest_4284 at 4476.759 kb on + strand at 4476.760 kb on - strand at 4476.760 kb on - strand at 4476.760 kb on - strand at 4476.760 kb on - strand at 4476.775 kb on - strand at 4476.775 kb on - strand at 4476.785 kb on + strand at 4476.842 kb on + strand at 4476.842 kb on + strand at 4476.842 kb on + strand at 4476.843 kb on - strand at 4476.843 kb on - strand at 4476.843 kb on - strand at 4476.890 kb on + strand at 4476.891 kb on - strand at 4476.965 kb on + strand at 4476.966 kb on - strand at 4476.966 kb on - strand at 4476.966 kb on - strand at 4477.034 kb on - strand at 4477.056 kb on + strand at 4477.056 kb on + strand at 4477.056 kb on + strand at 4477.056 kb on + strand at 4477.057 kb on - strand at 4477.253 kb on + strand, within Psest_4285 at 4477.253 kb on + strand, within Psest_4285 at 4477.383 kb on + strand, within Psest_4285 at 4477.383 kb on + strand, within Psest_4285 at 4477.384 kb on - strand, within Psest_4285 at 4477.384 kb on - strand, within Psest_4285 at 4477.482 kb on + strand, within Psest_4285 at 4477.483 kb on - strand, within Psest_4285 at 4477.617 kb on + strand, within Psest_4285 at 4477.618 kb on - strand, within Psest_4285 at 4477.620 kb on + strand, within Psest_4285 at 4477.620 kb on + strand, within Psest_4285 at 4477.621 kb on - strand, within Psest_4285 at 4477.621 kb on - strand, within Psest_4285 at 4477.621 kb on - strand, within Psest_4285
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 4,474,820 - Psest_4283 0.37 -0.9 4,474,845 + Psest_4283 0.39 -0.9 4,474,845 + Psest_4283 0.39 -1.6 4,474,846 - Psest_4283 0.39 -0.7 4,474,846 - Psest_4283 0.39 +0.5 4,474,863 + Psest_4283 0.41 -0.9 4,474,864 - Psest_4283 0.41 +1.3 4,474,950 + Psest_4283 0.49 -1.0 4,474,950 + Psest_4283 0.49 -1.2 4,474,950 + Psest_4283 0.49 +0.2 4,474,951 - Psest_4283 0.49 -0.3 4,474,951 - Psest_4283 0.49 -1.9 4,474,951 - Psest_4283 0.49 -0.6 4,475,100 + Psest_4283 0.63 -0.9 4,475,100 + Psest_4283 0.63 -0.7 4,475,128 - Psest_4283 0.65 -0.6 4,475,406 + -0.3 4,475,406 + -0.5 4,475,406 + -0.3 4,475,407 - -0.3 4,475,407 - -1.9 4,475,407 - -1.0 4,475,407 - -0.8 4,475,421 + -1.4 4,475,421 + -0.5 4,475,421 + -0.6 4,475,421 + +1.5 4,475,421 + +0.1 4,475,421 + +0.0 4,475,421 + -0.5 4,475,421 + +0.2 4,475,421 + -0.4 4,475,421 + -0.2 4,475,422 - -1.0 4,475,422 - -0.9 4,475,422 - -0.3 4,475,422 - -0.2 4,475,422 - -0.6 4,475,422 - -0.0 4,475,422 - -1.0 4,475,422 - -1.3 4,475,422 - -0.9 4,475,422 - -1.1 4,475,422 - +1.6 4,475,422 - -0.8 4,475,422 - -1.9 4,475,422 - +0.8 4,475,422 - -0.9 4,475,731 + -0.3 4,475,844 + -1.4 4,475,844 + -0.9 4,475,844 + -0.9 4,475,845 - +1.0 4,475,875 - -2.9 4,475,875 - -1.5 4,475,875 - -1.5 4,475,949 + Psest_4284 0.16 -2.9 4,475,949 + Psest_4284 0.16 -1.7 4,475,949 + Psest_4284 0.16 -0.1 4,475,949 + Psest_4284 0.16 -0.7 4,475,949 + Psest_4284 0.16 -0.9 4,475,949 + Psest_4284 0.16 -0.3 4,475,949 + Psest_4284 0.16 +0.4 4,475,949 + Psest_4284 0.16 -0.8 4,475,949 + Psest_4284 0.16 -1.1 4,475,949 + Psest_4284 0.16 -1.0 4,475,949 + Psest_4284 0.16 -0.9 4,475,949 + Psest_4284 0.16 -0.3 4,475,950 - Psest_4284 0.17 +1.0 4,475,950 - Psest_4284 0.17 +0.4 4,475,950 - Psest_4284 0.17 +0.5 4,475,950 - Psest_4284 0.17 -0.2 4,475,950 - Psest_4284 0.17 -0.7 4,475,950 - Psest_4284 0.17 -0.2 4,475,950 - Psest_4284 0.17 -0.2 4,475,950 - Psest_4284 0.17 -0.0 4,475,950 - Psest_4284 0.17 -0.5 4,475,950 - Psest_4284 0.17 +0.8 4,475,950 - Psest_4284 0.17 -0.7 4,475,950 - Psest_4284 0.17 -1.2 4,475,950 - Psest_4284 0.17 +0.3 4,475,950 - Psest_4284 0.17 +0.3 4,475,988 + Psest_4284 0.20 -0.2 4,475,988 + Psest_4284 0.20 -0.4 4,475,988 + Psest_4284 0.20 +0.0 4,475,988 + Psest_4284 0.20 -1.1 4,475,989 - Psest_4284 0.20 -0.4 4,475,989 - Psest_4284 0.20 -1.1 4,475,989 - Psest_4284 0.20 +0.2 4,475,989 - Psest_4284 0.20 -0.6 4,475,989 - Psest_4284 0.20 +0.8 4,476,135 + Psest_4284 0.33 -0.3 4,476,135 + Psest_4284 0.33 -1.8 4,476,135 + Psest_4284 0.33 -0.5 4,476,135 + Psest_4284 0.33 -1.8 4,476,135 + Psest_4284 0.33 -1.0 4,476,135 + Psest_4284 0.33 -0.4 4,476,135 + Psest_4284 0.33 -1.2 4,476,135 + Psest_4284 0.33 -1.4 4,476,135 + Psest_4284 0.33 +0.3 4,476,136 - Psest_4284 0.34 -1.3 4,476,136 - Psest_4284 0.34 -0.5 4,476,136 - Psest_4284 0.34 +0.3 4,476,136 - Psest_4284 0.34 -2.0 4,476,136 - Psest_4284 0.34 -0.4 4,476,195 + Psest_4284 0.39 -2.5 4,476,195 + Psest_4284 0.39 -0.3 4,476,195 + Psest_4284 0.39 -0.3 4,476,195 + Psest_4284 0.39 -0.5 4,476,195 + Psest_4284 0.39 -0.1 4,476,195 + Psest_4284 0.39 -0.5 4,476,195 + Psest_4284 0.39 -1.6 4,476,196 - Psest_4284 0.39 +0.6 4,476,196 - Psest_4284 0.39 -2.1 4,476,196 - Psest_4284 0.39 -0.1 4,476,196 - Psest_4284 0.39 -0.6 4,476,196 - Psest_4284 0.39 -0.0 4,476,196 - Psest_4284 0.39 -1.4 4,476,196 - Psest_4284 0.39 -0.3 4,476,300 + Psest_4284 0.48 +0.2 4,476,301 - Psest_4284 0.49 -2.0 4,476,301 - Psest_4284 0.49 -0.9 4,476,453 + Psest_4284 0.62 -0.7 4,476,480 + Psest_4284 0.65 +1.3 4,476,480 + Psest_4284 0.65 -0.2 4,476,481 - Psest_4284 0.65 -1.0 4,476,702 + Psest_4284 0.85 -1.2 4,476,759 + -0.1 4,476,760 - -0.6 4,476,760 - -0.9 4,476,760 - -1.8 4,476,760 - -0.1 4,476,775 - -1.9 4,476,775 - -1.2 4,476,785 + -1.4 4,476,842 + -1.2 4,476,842 + -0.1 4,476,842 + -1.2 4,476,843 - -1.3 4,476,843 - -1.5 4,476,843 - -0.8 4,476,890 + +0.3 4,476,891 - -1.6 4,476,965 + +0.7 4,476,966 - +1.2 4,476,966 - +1.5 4,476,966 - +0.6 4,477,034 - +1.3 4,477,056 + -0.9 4,477,056 + -0.9 4,477,056 + +0.2 4,477,056 + -0.4 4,477,057 - +0.6 4,477,253 + Psest_4285 0.12 -0.0 4,477,253 + Psest_4285 0.12 -0.3 4,477,383 + Psest_4285 0.22 +2.6 4,477,383 + Psest_4285 0.22 +0.7 4,477,384 - Psest_4285 0.22 +0.3 4,477,384 - Psest_4285 0.22 +0.6 4,477,482 + Psest_4285 0.29 +0.5 4,477,483 - Psest_4285 0.29 +0.3 4,477,617 + Psest_4285 0.39 -0.3 4,477,618 - Psest_4285 0.39 +1.7 4,477,620 + Psest_4285 0.39 -0.1 4,477,620 + Psest_4285 0.39 -0.1 4,477,621 - Psest_4285 0.39 -0.3 4,477,621 - Psest_4285 0.39 -0.6 4,477,621 - Psest_4285 0.39 +0.5
Or see this region's nucleotide sequence