Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_4105 and HP15_4106 are separated by 30 nucleotides HP15_4106 and HP15_4107 are separated by 197 nucleotides HP15_4107 and HP15_4108 overlap by 4 nucleotides HP15_4108 and HP15_4109 are separated by 6 nucleotides
HP15_4105: HP15_4105 - hypothetical protein, at 4,338,871 to 4,339,170
_4105
HP15_4106: HP15_4106 - conserved hypothetical protein, secreted, at 4,339,201 to 4,339,587
_4106
HP15_4107: HP15_4107 - endonuclease 8, at 4,339,785 to 4,340,600
_4107
HP15_4108: HP15_4108 - translation factor, SUA5 type, at 4,340,597 to 4,341,586
_4108
HP15_4109: HP15_4109 - conserved hypothetical protein, at 4,341,593 to 4,342,414
_4109
Position (kb) 4339
4340
4341 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4338.833 kb on + strand at 4338.903 kb on + strand, within HP15_4105 at 4338.974 kb on - strand, within HP15_4105 at 4339.088 kb on + strand, within HP15_4105 at 4339.164 kb on + strand at 4339.220 kb on - strand at 4339.376 kb on + strand, within HP15_4106 at 4339.388 kb on - strand, within HP15_4106 at 4339.481 kb on + strand, within HP15_4106 at 4339.489 kb on - strand, within HP15_4106 at 4339.569 kb on - strand at 4339.569 kb on - strand at 4339.574 kb on - strand at 4339.651 kb on - strand at 4339.707 kb on + strand at 4339.715 kb on - strand at 4339.715 kb on - strand at 4339.720 kb on - strand at 4339.752 kb on - strand at 4339.814 kb on + strand at 4339.853 kb on + strand at 4339.861 kb on - strand at 4339.910 kb on + strand, within HP15_4107 at 4339.910 kb on + strand, within HP15_4107 at 4339.918 kb on - strand, within HP15_4107 at 4339.944 kb on + strand, within HP15_4107 at 4339.952 kb on - strand, within HP15_4107 at 4340.003 kb on + strand, within HP15_4107 at 4340.105 kb on + strand, within HP15_4107 at 4340.151 kb on + strand, within HP15_4107 at 4340.311 kb on + strand, within HP15_4107 at 4340.431 kb on + strand, within HP15_4107 at 4340.442 kb on - strand, within HP15_4107 at 4340.502 kb on + strand, within HP15_4107 at 4340.510 kb on - strand, within HP15_4107 at 4340.562 kb on - strand at 4340.587 kb on - strand at 4340.589 kb on + strand at 4340.613 kb on + strand at 4340.613 kb on + strand at 4340.613 kb on + strand at 4340.613 kb on + strand at 4340.613 kb on + strand at 4340.621 kb on - strand at 4340.621 kb on - strand at 4340.621 kb on - strand at 4340.661 kb on - strand at 4340.721 kb on + strand, within HP15_4108 at 4340.729 kb on - strand, within HP15_4108 at 4340.887 kb on - strand, within HP15_4108 at 4340.918 kb on + strand, within HP15_4108 at 4340.926 kb on - strand, within HP15_4108 at 4340.926 kb on - strand, within HP15_4108 at 4341.006 kb on - strand, within HP15_4108 at 4341.032 kb on - strand, within HP15_4108 at 4341.066 kb on - strand, within HP15_4108 at 4341.077 kb on + strand, within HP15_4108 at 4341.077 kb on + strand, within HP15_4108 at 4341.129 kb on - strand, within HP15_4108 at 4341.376 kb on - strand, within HP15_4108 at 4341.556 kb on + strand at 4341.589 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 4,338,833 + +0.5 4,338,903 + HP15_4105 0.11 +0.5 4,338,974 - HP15_4105 0.34 -0.0 4,339,088 + HP15_4105 0.72 +0.6 4,339,164 + -0.0 4,339,220 - +0.1 4,339,376 + HP15_4106 0.45 +0.7 4,339,388 - HP15_4106 0.48 -0.3 4,339,481 + HP15_4106 0.72 -1.7 4,339,489 - HP15_4106 0.74 -0.3 4,339,569 - -1.4 4,339,569 - +0.1 4,339,574 - +0.0 4,339,651 - -0.4 4,339,707 + -2.1 4,339,715 - +1.2 4,339,715 - +0.0 4,339,720 - -0.6 4,339,752 - -0.4 4,339,814 + +0.2 4,339,853 + -0.3 4,339,861 - +0.2 4,339,910 + HP15_4107 0.15 +0.1 4,339,910 + HP15_4107 0.15 -0.6 4,339,918 - HP15_4107 0.16 +0.7 4,339,944 + HP15_4107 0.19 -1.4 4,339,952 - HP15_4107 0.20 -0.7 4,340,003 + HP15_4107 0.27 -0.4 4,340,105 + HP15_4107 0.39 -3.6 4,340,151 + HP15_4107 0.45 -3.0 4,340,311 + HP15_4107 0.64 +0.3 4,340,431 + HP15_4107 0.79 -0.9 4,340,442 - HP15_4107 0.81 -0.4 4,340,502 + HP15_4107 0.88 -1.2 4,340,510 - HP15_4107 0.89 -1.2 4,340,562 - +0.0 4,340,587 - +0.3 4,340,589 + +0.9 4,340,613 + -1.7 4,340,613 + -0.5 4,340,613 + -0.4 4,340,613 + +1.9 4,340,613 + -2.0 4,340,621 - +0.7 4,340,621 - +0.5 4,340,621 - +0.6 4,340,661 - +0.1 4,340,721 + HP15_4108 0.13 +0.2 4,340,729 - HP15_4108 0.13 -0.3 4,340,887 - HP15_4108 0.29 +0.9 4,340,918 + HP15_4108 0.32 +0.1 4,340,926 - HP15_4108 0.33 +0.5 4,340,926 - HP15_4108 0.33 -0.3 4,341,006 - HP15_4108 0.41 -0.6 4,341,032 - HP15_4108 0.44 +0.1 4,341,066 - HP15_4108 0.47 +0.9 4,341,077 + HP15_4108 0.48 -3.0 4,341,077 + HP15_4108 0.48 +1.3 4,341,129 - HP15_4108 0.54 +0.9 4,341,376 - HP15_4108 0.79 -0.1 4,341,556 + -1.0 4,341,589 + -1.0
Or see this region's nucleotide sequence