Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_4012 and HP15_4013 are separated by 70 nucleotides HP15_4013 and HP15_4014 are separated by 93 nucleotides HP15_4014 and HP15_4015 overlap by 7 nucleotides HP15_4015 and HP15_4016 are separated by 16 nucleotides
HP15_4012: HP15_4012 - conserved hypothetical protein, at 4,246,875 to 4,247,132
_4012
HP15_4013: HP15_4013 - DTW domain containing protein, at 4,247,203 to 4,247,709
_4013
HP15_4014: HP15_4014 - FAD dependent oxidoreductase, at 4,247,803 to 4,249,461
_4014
HP15_4015: HP15_4015 - conserved hypothetical protein, at 4,249,455 to 4,249,961
_4015
HP15_4016: HP15_4016 - deoxyribodipyrimidine photolyase, at 4,249,978 to 4,251,300
_4016
Position (kb)
4247
4248
4249
4250 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4246.830 kb on + strand at 4246.836 kb on - strand at 4246.911 kb on + strand, within HP15_4012 at 4246.911 kb on + strand, within HP15_4012 at 4246.919 kb on - strand, within HP15_4012 at 4246.919 kb on - strand, within HP15_4012 at 4246.919 kb on - strand, within HP15_4012 at 4246.926 kb on - strand, within HP15_4012 at 4246.926 kb on - strand, within HP15_4012 at 4246.983 kb on - strand, within HP15_4012 at 4247.036 kb on + strand, within HP15_4012 at 4247.044 kb on - strand, within HP15_4012 at 4247.066 kb on - strand, within HP15_4012 at 4247.114 kb on + strand at 4247.136 kb on - strand at 4247.221 kb on - strand at 4247.251 kb on + strand at 4247.295 kb on + strand, within HP15_4013 at 4247.295 kb on + strand, within HP15_4013 at 4247.344 kb on - strand, within HP15_4013 at 4247.375 kb on + strand, within HP15_4013 at 4247.505 kb on + strand, within HP15_4013 at 4247.531 kb on - strand, within HP15_4013 at 4247.590 kb on - strand, within HP15_4013 at 4247.623 kb on - strand, within HP15_4013 at 4247.660 kb on + strand at 4247.853 kb on - strand at 4247.869 kb on - strand at 4247.897 kb on + strand at 4247.905 kb on - strand at 4247.931 kb on + strand at 4247.933 kb on - strand at 4247.939 kb on - strand at 4247.974 kb on + strand, within HP15_4014 at 4247.996 kb on + strand, within HP15_4014 at 4247.996 kb on - strand, within HP15_4014 at 4248.028 kb on - strand, within HP15_4014 at 4248.043 kb on - strand, within HP15_4014 at 4248.045 kb on + strand, within HP15_4014 at 4248.045 kb on + strand, within HP15_4014 at 4248.053 kb on - strand, within HP15_4014 at 4248.072 kb on - strand, within HP15_4014 at 4248.132 kb on + strand, within HP15_4014 at 4248.328 kb on + strand, within HP15_4014 at 4248.328 kb on + strand, within HP15_4014 at 4248.387 kb on + strand, within HP15_4014 at 4248.444 kb on - strand, within HP15_4014 at 4248.544 kb on + strand, within HP15_4014 at 4248.607 kb on - strand, within HP15_4014 at 4248.707 kb on + strand, within HP15_4014 at 4248.707 kb on + strand, within HP15_4014 at 4248.707 kb on + strand, within HP15_4014 at 4248.727 kb on - strand, within HP15_4014 at 4248.761 kb on - strand, within HP15_4014 at 4248.768 kb on + strand, within HP15_4014 at 4248.849 kb on + strand, within HP15_4014 at 4248.889 kb on + strand, within HP15_4014 at 4248.909 kb on - strand, within HP15_4014 at 4248.952 kb on - strand, within HP15_4014 at 4248.989 kb on - strand, within HP15_4014 at 4248.989 kb on - strand, within HP15_4014 at 4249.022 kb on + strand, within HP15_4014 at 4249.029 kb on + strand, within HP15_4014 at 4249.186 kb on - strand, within HP15_4014 at 4249.259 kb on + strand, within HP15_4014 at 4249.259 kb on + strand, within HP15_4014 at 4249.267 kb on - strand, within HP15_4014 at 4249.319 kb on - strand at 4249.326 kb on - strand at 4249.438 kb on + strand at 4249.489 kb on + strand at 4249.489 kb on + strand at 4249.497 kb on - strand at 4249.514 kb on - strand, within HP15_4015 at 4249.515 kb on - strand, within HP15_4015 at 4249.539 kb on - strand, within HP15_4015 at 4249.554 kb on - strand, within HP15_4015 at 4249.556 kb on - strand, within HP15_4015 at 4249.623 kb on + strand, within HP15_4015 at 4249.691 kb on + strand, within HP15_4015 at 4249.729 kb on - strand, within HP15_4015 at 4249.756 kb on - strand, within HP15_4015 at 4249.772 kb on + strand, within HP15_4015 at 4249.780 kb on - strand, within HP15_4015 at 4249.908 kb on + strand, within HP15_4015 at 4250.008 kb on + strand at 4250.008 kb on + strand at 4250.016 kb on - strand at 4250.016 kb on - strand at 4250.016 kb on - strand at 4250.016 kb on - strand at 4250.016 kb on - strand at 4250.016 kb on - strand at 4250.016 kb on - strand at 4250.070 kb on - strand at 4250.111 kb on + strand, within HP15_4016 at 4250.119 kb on - strand, within HP15_4016 at 4250.338 kb on - strand, within HP15_4016 at 4250.427 kb on + strand, within HP15_4016 at 4250.435 kb on - strand, within HP15_4016
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 4,246,830 + +0.6 4,246,836 - +0.2 4,246,911 + HP15_4012 0.14 +0.2 4,246,911 + HP15_4012 0.14 +0.7 4,246,919 - HP15_4012 0.17 -0.1 4,246,919 - HP15_4012 0.17 +0.1 4,246,919 - HP15_4012 0.17 +0.0 4,246,926 - HP15_4012 0.20 -0.1 4,246,926 - HP15_4012 0.20 -0.1 4,246,983 - HP15_4012 0.42 -1.8 4,247,036 + HP15_4012 0.62 +0.5 4,247,044 - HP15_4012 0.66 -0.7 4,247,066 - HP15_4012 0.74 +1.0 4,247,114 + -0.1 4,247,136 - -3.3 4,247,221 - -0.4 4,247,251 + +0.9 4,247,295 + HP15_4013 0.18 -0.0 4,247,295 + HP15_4013 0.18 +0.0 4,247,344 - HP15_4013 0.28 -2.3 4,247,375 + HP15_4013 0.34 +0.7 4,247,505 + HP15_4013 0.60 +1.2 4,247,531 - HP15_4013 0.65 -0.7 4,247,590 - HP15_4013 0.76 +0.8 4,247,623 - HP15_4013 0.83 -0.0 4,247,660 + +0.8 4,247,853 - +0.3 4,247,869 - +0.1 4,247,897 + +0.6 4,247,905 - -0.1 4,247,931 + +0.2 4,247,933 - +0.4 4,247,939 - -2.2 4,247,974 + HP15_4014 0.10 +0.1 4,247,996 + HP15_4014 0.12 +0.6 4,247,996 - HP15_4014 0.12 +0.4 4,248,028 - HP15_4014 0.14 -0.5 4,248,043 - HP15_4014 0.14 +0.0 4,248,045 + HP15_4014 0.15 +0.5 4,248,045 + HP15_4014 0.15 +0.3 4,248,053 - HP15_4014 0.15 -0.5 4,248,072 - HP15_4014 0.16 -0.1 4,248,132 + HP15_4014 0.20 -0.9 4,248,328 + HP15_4014 0.32 -1.9 4,248,328 + HP15_4014 0.32 -0.9 4,248,387 + HP15_4014 0.35 -3.1 4,248,444 - HP15_4014 0.39 -0.2 4,248,544 + HP15_4014 0.45 +0.3 4,248,607 - HP15_4014 0.48 -0.2 4,248,707 + HP15_4014 0.54 +0.1 4,248,707 + HP15_4014 0.54 +0.6 4,248,707 + HP15_4014 0.54 -2.8 4,248,727 - HP15_4014 0.56 +0.1 4,248,761 - HP15_4014 0.58 +1.2 4,248,768 + HP15_4014 0.58 +0.6 4,248,849 + HP15_4014 0.63 +0.5 4,248,889 + HP15_4014 0.65 -0.4 4,248,909 - HP15_4014 0.67 +0.3 4,248,952 - HP15_4014 0.69 +1.6 4,248,989 - HP15_4014 0.71 +0.2 4,248,989 - HP15_4014 0.71 -0.1 4,249,022 + HP15_4014 0.73 -0.1 4,249,029 + HP15_4014 0.74 +0.2 4,249,186 - HP15_4014 0.83 -0.1 4,249,259 + HP15_4014 0.88 -0.5 4,249,259 + HP15_4014 0.88 -2.3 4,249,267 - HP15_4014 0.88 +0.0 4,249,319 - +0.9 4,249,326 - +0.6 4,249,438 + +0.1 4,249,489 + +1.2 4,249,489 + -0.7 4,249,497 - -1.3 4,249,514 - HP15_4015 0.12 +0.3 4,249,515 - HP15_4015 0.12 +0.3 4,249,539 - HP15_4015 0.17 +1.0 4,249,554 - HP15_4015 0.20 -0.5 4,249,556 - HP15_4015 0.20 +1.0 4,249,623 + HP15_4015 0.33 -1.9 4,249,691 + HP15_4015 0.47 -1.4 4,249,729 - HP15_4015 0.54 +0.3 4,249,756 - HP15_4015 0.59 -1.8 4,249,772 + HP15_4015 0.63 +0.1 4,249,780 - HP15_4015 0.64 +0.2 4,249,908 + HP15_4015 0.89 -0.2 4,250,008 + +0.9 4,250,008 + -1.7 4,250,016 - -0.1 4,250,016 - -0.0 4,250,016 - +1.0 4,250,016 - +1.0 4,250,016 - -0.1 4,250,016 - -0.4 4,250,016 - +0.3 4,250,070 - -0.6 4,250,111 + HP15_4016 0.10 -0.3 4,250,119 - HP15_4016 0.11 +0.3 4,250,338 - HP15_4016 0.27 +0.4 4,250,427 + HP15_4016 0.34 -1.7 4,250,435 - HP15_4016 0.35 +1.9
Or see this region's nucleotide sequence