Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3925 and HP15_3926 are separated by 30 nucleotides HP15_3926 and HP15_3927 are separated by 20 nucleotides HP15_3927 and HP15_3928 are separated by 341 nucleotides
HP15_3925: HP15_3925 - phosphotransferase enzyme family protein, at 4,154,015 to 4,155,079
_3925
HP15_3926: HP15_3926 - acyl-CoA synthetase, at 4,155,110 to 4,156,774
_3926
HP15_3927: HP15_3927 - protein containing helix-turn-helix type 3 domain, at 4,156,795 to 4,157,160
_3927
HP15_3928: HP15_3928 - acyl-CoA dehydrogenase domain protein, at 4,157,502 to 4,158,638
_3928
Position (kb)
4155
4156
4157 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4154.142 kb on - strand, within HP15_3925 at 4154.185 kb on + strand, within HP15_3925 at 4154.187 kb on + strand, within HP15_3925 at 4154.195 kb on - strand, within HP15_3925 at 4154.257 kb on + strand, within HP15_3925 at 4154.310 kb on - strand, within HP15_3925 at 4154.344 kb on + strand, within HP15_3925 at 4154.369 kb on - strand, within HP15_3925 at 4154.390 kb on + strand, within HP15_3925 at 4154.434 kb on - strand, within HP15_3925 at 4154.559 kb on - strand, within HP15_3925 at 4154.587 kb on + strand, within HP15_3925 at 4154.617 kb on + strand, within HP15_3925 at 4154.629 kb on + strand, within HP15_3925 at 4154.708 kb on + strand, within HP15_3925 at 4154.772 kb on + strand, within HP15_3925 at 4154.780 kb on - strand, within HP15_3925 at 4154.799 kb on - strand, within HP15_3925 at 4154.839 kb on - strand, within HP15_3925 at 4154.909 kb on + strand, within HP15_3925 at 4155.034 kb on + strand at 4155.095 kb on - strand at 4155.138 kb on - strand at 4155.196 kb on - strand at 4155.221 kb on - strand at 4155.221 kb on - strand at 4155.373 kb on + strand, within HP15_3926 at 4155.501 kb on + strand, within HP15_3926 at 4155.534 kb on - strand, within HP15_3926 at 4155.584 kb on + strand, within HP15_3926 at 4155.587 kb on - strand, within HP15_3926 at 4155.592 kb on - strand, within HP15_3926 at 4155.592 kb on - strand, within HP15_3926 at 4155.592 kb on - strand, within HP15_3926 at 4155.624 kb on - strand, within HP15_3926 at 4155.629 kb on - strand, within HP15_3926 at 4155.686 kb on - strand, within HP15_3926 at 4155.756 kb on + strand, within HP15_3926 at 4155.791 kb on + strand, within HP15_3926 at 4156.087 kb on + strand, within HP15_3926 at 4156.095 kb on - strand, within HP15_3926 at 4156.097 kb on - strand, within HP15_3926 at 4156.129 kb on + strand, within HP15_3926 at 4156.137 kb on - strand, within HP15_3926 at 4156.142 kb on + strand, within HP15_3926 at 4156.142 kb on - strand, within HP15_3926 at 4156.203 kb on - strand, within HP15_3926 at 4156.275 kb on + strand, within HP15_3926 at 4156.326 kb on - strand, within HP15_3926 at 4156.503 kb on + strand, within HP15_3926 at 4156.600 kb on - strand, within HP15_3926 at 4156.633 kb on + strand at 4156.665 kb on + strand at 4156.945 kb on - strand, within HP15_3927 at 4157.070 kb on + strand, within HP15_3927 at 4157.078 kb on - strand, within HP15_3927 at 4157.078 kb on - strand, within HP15_3927 at 4157.087 kb on + strand, within HP15_3927 at 4157.087 kb on + strand, within HP15_3927 at 4157.090 kb on - strand, within HP15_3927 at 4157.097 kb on + strand, within HP15_3927 at 4157.353 kb on + strand at 4157.413 kb on + strand at 4157.439 kb on + strand at 4157.478 kb on - strand at 4157.518 kb on + strand at 4157.518 kb on + strand at 4157.539 kb on - strand at 4157.603 kb on - strand at 4157.603 kb on - strand at 4157.637 kb on + strand, within HP15_3928 at 4157.687 kb on - strand, within HP15_3928
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 4,154,142 - HP15_3925 0.12 -1.9 4,154,185 + HP15_3925 0.16 -1.0 4,154,187 + HP15_3925 0.16 +0.3 4,154,195 - HP15_3925 0.17 -0.6 4,154,257 + HP15_3925 0.23 -2.4 4,154,310 - HP15_3925 0.28 +1.1 4,154,344 + HP15_3925 0.31 -0.2 4,154,369 - HP15_3925 0.33 +0.6 4,154,390 + HP15_3925 0.35 +1.3 4,154,434 - HP15_3925 0.39 +0.7 4,154,559 - HP15_3925 0.51 -0.8 4,154,587 + HP15_3925 0.54 +0.1 4,154,617 + HP15_3925 0.57 -0.1 4,154,629 + HP15_3925 0.58 -1.4 4,154,708 + HP15_3925 0.65 +0.0 4,154,772 + HP15_3925 0.71 -0.3 4,154,780 - HP15_3925 0.72 -2.0 4,154,799 - HP15_3925 0.74 -3.3 4,154,839 - HP15_3925 0.77 +0.8 4,154,909 + HP15_3925 0.84 +0.4 4,155,034 + -0.0 4,155,095 - -0.0 4,155,138 - +1.7 4,155,196 - +1.3 4,155,221 - +0.5 4,155,221 - -1.1 4,155,373 + HP15_3926 0.16 +0.6 4,155,501 + HP15_3926 0.23 -1.5 4,155,534 - HP15_3926 0.25 -0.2 4,155,584 + HP15_3926 0.28 +0.5 4,155,587 - HP15_3926 0.29 +2.0 4,155,592 - HP15_3926 0.29 +0.6 4,155,592 - HP15_3926 0.29 -1.2 4,155,592 - HP15_3926 0.29 +0.0 4,155,624 - HP15_3926 0.31 -0.3 4,155,629 - HP15_3926 0.31 +0.6 4,155,686 - HP15_3926 0.35 +0.7 4,155,756 + HP15_3926 0.39 +1.5 4,155,791 + HP15_3926 0.41 -0.4 4,156,087 + HP15_3926 0.59 +0.3 4,156,095 - HP15_3926 0.59 +0.5 4,156,097 - HP15_3926 0.59 -0.0 4,156,129 + HP15_3926 0.61 +0.9 4,156,137 - HP15_3926 0.62 +0.6 4,156,142 + HP15_3926 0.62 +0.2 4,156,142 - HP15_3926 0.62 +1.2 4,156,203 - HP15_3926 0.66 +0.4 4,156,275 + HP15_3926 0.70 -1.3 4,156,326 - HP15_3926 0.73 -0.2 4,156,503 + HP15_3926 0.84 -0.3 4,156,600 - HP15_3926 0.89 +2.7 4,156,633 + +0.4 4,156,665 + +1.4 4,156,945 - HP15_3927 0.41 +0.0 4,157,070 + HP15_3927 0.75 -0.2 4,157,078 - HP15_3927 0.77 +0.4 4,157,078 - HP15_3927 0.77 -0.5 4,157,087 + HP15_3927 0.80 -0.1 4,157,087 + HP15_3927 0.80 +0.6 4,157,090 - HP15_3927 0.81 +0.4 4,157,097 + HP15_3927 0.83 -1.6 4,157,353 + +0.7 4,157,413 + -0.9 4,157,439 + +0.1 4,157,478 - -0.4 4,157,518 + -0.5 4,157,518 + -0.5 4,157,539 - +3.4 4,157,603 - +2.5 4,157,603 - +2.3 4,157,637 + HP15_3928 0.12 +2.1 4,157,687 - HP15_3928 0.16 +1.5
Or see this region's nucleotide sequence