Strain Fitness in Marinobacter adhaerens HP15 around HP15_3746

Experiment: m.b. Benzethonium chloride 0.025 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3745 and HP15_3746 are separated by 70 nucleotidesHP15_3746 and HP15_3747 are separated by 45 nucleotidesHP15_3747 and HP15_3748 are separated by 8 nucleotides HP15_3745: HP15_3745 - protein containing LysM domain, at 3,967,364 to 3,968,380 _3745 HP15_3746: HP15_3746 - DNA protecting protein DprA, at 3,968,451 to 3,969,593 _3746 HP15_3747: HP15_3747 - Sua5/YciO/YrdC/YwlC family protein, at 3,969,639 to 3,970,211 _3747 HP15_3748: HP15_3748 - coproporphyrinogen III oxidase, aerobic, at 3,970,220 to 3,970,621 _3748 Position (kb) 3968 3969 3970Strain fitness (log2 ratio) -7 -6 -5 -4 -3 -2 -1 0 1 2at 3967.456 kb on + strandat 3967.464 kb on - strandat 3967.474 kb on + strand, within HP15_3745at 3967.474 kb on + strand, within HP15_3745at 3967.484 kb on + strand, within HP15_3745at 3967.576 kb on - strand, within HP15_3745at 3967.608 kb on - strand, within HP15_3745at 3967.626 kb on - strand, within HP15_3745at 3967.674 kb on + strand, within HP15_3745at 3967.751 kb on - strand, within HP15_3745at 3967.751 kb on - strand, within HP15_3745at 3967.755 kb on + strand, within HP15_3745at 3967.763 kb on - strand, within HP15_3745at 3967.793 kb on + strand, within HP15_3745at 3967.801 kb on - strand, within HP15_3745at 3967.815 kb on - strand, within HP15_3745at 3967.923 kb on + strand, within HP15_3745at 3967.923 kb on + strand, within HP15_3745at 3967.931 kb on - strand, within HP15_3745at 3967.931 kb on - strand, within HP15_3745at 3967.931 kb on - strand, within HP15_3745at 3967.931 kb on - strand, within HP15_3745at 3967.931 kb on - strand, within HP15_3745at 3967.931 kb on - strand, within HP15_3745at 3967.931 kb on - strand, within HP15_3745at 3967.931 kb on - strand, within HP15_3745at 3967.931 kb on - strand, within HP15_3745at 3967.938 kb on + strand, within HP15_3745at 3967.938 kb on + strand, within HP15_3745at 3967.938 kb on + strand, within HP15_3745at 3967.946 kb on - strand, within HP15_3745at 3967.976 kb on + strand, within HP15_3745at 3967.988 kb on + strand, within HP15_3745at 3967.991 kb on - strand, within HP15_3745at 3967.998 kb on + strand, within HP15_3745at 3968.001 kb on - strand, within HP15_3745at 3968.056 kb on + strand, within HP15_3745at 3968.138 kb on + strand, within HP15_3745at 3968.181 kb on + strand, within HP15_3745at 3968.215 kb on - strand, within HP15_3745at 3968.258 kb on + strand, within HP15_3745at 3968.301 kb on - strandat 3968.322 kb on + strandat 3968.406 kb on + strandat 3968.410 kb on + strandat 3968.500 kb on + strandat 3968.514 kb on - strandat 3968.514 kb on - strandat 3968.580 kb on - strand, within HP15_3746at 3968.619 kb on + strand, within HP15_3746at 3968.675 kb on - strand, within HP15_3746at 3968.709 kb on + strand, within HP15_3746at 3968.709 kb on + strand, within HP15_3746at 3968.717 kb on - strand, within HP15_3746at 3968.717 kb on - strand, within HP15_3746at 3968.742 kb on - strand, within HP15_3746at 3968.742 kb on - strand, within HP15_3746at 3968.742 kb on - strand, within HP15_3746at 3968.744 kb on + strand, within HP15_3746at 3968.745 kb on + strand, within HP15_3746at 3968.766 kb on + strand, within HP15_3746at 3968.772 kb on + strand, within HP15_3746at 3968.842 kb on - strand, within HP15_3746at 3968.901 kb on - strand, within HP15_3746at 3968.941 kb on - strand, within HP15_3746at 3968.946 kb on - strand, within HP15_3746at 3968.967 kb on + strand, within HP15_3746at 3968.977 kb on - strand, within HP15_3746at 3969.000 kb on - strand, within HP15_3746at 3969.008 kb on + strand, within HP15_3746at 3969.008 kb on + strand, within HP15_3746at 3969.008 kb on + strand, within HP15_3746at 3969.092 kb on + strand, within HP15_3746at 3969.092 kb on + strand, within HP15_3746at 3969.100 kb on - strand, within HP15_3746at 3969.100 kb on - strand, within HP15_3746at 3969.135 kb on + strand, within HP15_3746at 3969.173 kb on + strand, within HP15_3746at 3969.176 kb on - strand, within HP15_3746at 3969.212 kb on - strand, within HP15_3746at 3969.253 kb on + strand, within HP15_3746at 3969.254 kb on - strand, within HP15_3746at 3969.254 kb on - strand, within HP15_3746at 3969.256 kb on - strand, within HP15_3746at 3969.261 kb on - strand, within HP15_3746at 3969.310 kb on + strand, within HP15_3746at 3969.318 kb on - strand, within HP15_3746at 3969.392 kb on + strand, within HP15_3746at 3969.443 kb on + strand, within HP15_3746at 3969.443 kb on + strand, within HP15_3746at 3969.450 kb on + strand, within HP15_3746at 3969.451 kb on - strand, within HP15_3746at 3969.488 kb on - strandat 3969.533 kb on - strandat 3969.567 kb on - strandat 3969.646 kb on + strandat 3969.730 kb on - strand, within HP15_3747at 3969.797 kb on + strand, within HP15_3747at 3969.804 kb on + strand, within HP15_3747at 3969.812 kb on - strand, within HP15_3747at 3969.878 kb on + strand, within HP15_3747at 3969.878 kb on + strand, within HP15_3747at 3969.899 kb on + strand, within HP15_3747at 3969.902 kb on - strand, within HP15_3747at 3969.907 kb on - strand, within HP15_3747at 3969.912 kb on + strand, within HP15_3747at 3969.979 kb on - strand, within HP15_3747at 3970.049 kb on - strand, within HP15_3747

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM
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3,967,456 + -3.7
3,967,464 - -4.3
3,967,474 + HP15_3745 0.11 -7.6
3,967,474 + HP15_3745 0.11 -3.7
3,967,484 + HP15_3745 0.12 -2.3
3,967,576 - HP15_3745 0.21 -5.8
3,967,608 - HP15_3745 0.24 -5.6
3,967,626 - HP15_3745 0.26 -5.8
3,967,674 + HP15_3745 0.30 -4.7
3,967,751 - HP15_3745 0.38 -0.1
3,967,751 - HP15_3745 0.38 -1.1
3,967,755 + HP15_3745 0.38 -1.4
3,967,763 - HP15_3745 0.39 -6.1
3,967,793 + HP15_3745 0.42 -1.7
3,967,801 - HP15_3745 0.43 -6.9
3,967,815 - HP15_3745 0.44 -4.6
3,967,923 + HP15_3745 0.55 -4.8
3,967,923 + HP15_3745 0.55 -4.7
3,967,931 - HP15_3745 0.56 -5.8
3,967,931 - HP15_3745 0.56 -5.7
3,967,931 - HP15_3745 0.56 -5.4
3,967,931 - HP15_3745 0.56 -3.5
3,967,931 - HP15_3745 0.56 -3.0
3,967,931 - HP15_3745 0.56 -6.3
3,967,931 - HP15_3745 0.56 -4.4
3,967,931 - HP15_3745 0.56 -3.5
3,967,931 - HP15_3745 0.56 -6.6
3,967,938 + HP15_3745 0.56 -5.5
3,967,938 + HP15_3745 0.56 -4.4
3,967,938 + HP15_3745 0.56 -2.7
3,967,946 - HP15_3745 0.57 -3.6
3,967,976 + HP15_3745 0.60 -3.4
3,967,988 + HP15_3745 0.61 -6.9
3,967,991 - HP15_3745 0.62 -4.8
3,967,998 + HP15_3745 0.62 -6.9
3,968,001 - HP15_3745 0.63 +0.9
3,968,056 + HP15_3745 0.68 -4.7
3,968,138 + HP15_3745 0.76 -6.2
3,968,181 + HP15_3745 0.80 -2.1
3,968,215 - HP15_3745 0.84 -3.7
3,968,258 + HP15_3745 0.88 -3.3
3,968,301 - -6.6
3,968,322 + -6.9
3,968,406 + +0.4
3,968,410 + -0.3
3,968,500 + +0.2
3,968,514 - -0.9
3,968,514 - +0.4
3,968,580 - HP15_3746 0.11 -1.4
3,968,619 + HP15_3746 0.15 -0.3
3,968,675 - HP15_3746 0.20 -0.5
3,968,709 + HP15_3746 0.23 -0.7
3,968,709 + HP15_3746 0.23 +0.6
3,968,717 - HP15_3746 0.23 -0.0
3,968,717 - HP15_3746 0.23 +0.6
3,968,742 - HP15_3746 0.25 -1.0
3,968,742 - HP15_3746 0.25 -0.6
3,968,742 - HP15_3746 0.25 -1.4
3,968,744 + HP15_3746 0.26 -0.5
3,968,745 + HP15_3746 0.26 -0.4
3,968,766 + HP15_3746 0.28 +0.4
3,968,772 + HP15_3746 0.28 -0.6
3,968,842 - HP15_3746 0.34 -0.6
3,968,901 - HP15_3746 0.39 +0.6
3,968,941 - HP15_3746 0.43 -2.6
3,968,946 - HP15_3746 0.43 +0.6
3,968,967 + HP15_3746 0.45 +0.2
3,968,977 - HP15_3746 0.46 +0.0
3,969,000 - HP15_3746 0.48 -0.9
3,969,008 + HP15_3746 0.49 +0.3
3,969,008 + HP15_3746 0.49 +0.1
3,969,008 + HP15_3746 0.49 +0.2
3,969,092 + HP15_3746 0.56 -0.8
3,969,092 + HP15_3746 0.56 -2.3
3,969,100 - HP15_3746 0.57 -2.7
3,969,100 - HP15_3746 0.57 +0.4
3,969,135 + HP15_3746 0.60 -0.2
3,969,173 + HP15_3746 0.63 -0.2
3,969,176 - HP15_3746 0.63 -1.3
3,969,212 - HP15_3746 0.67 -2.3
3,969,253 + HP15_3746 0.70 -0.0
3,969,254 - HP15_3746 0.70 -0.2
3,969,254 - HP15_3746 0.70 -0.5
3,969,256 - HP15_3746 0.70 -2.5
3,969,261 - HP15_3746 0.71 -0.4
3,969,310 + HP15_3746 0.75 +0.9
3,969,318 - HP15_3746 0.76 +1.2
3,969,392 + HP15_3746 0.82 +0.8
3,969,443 + HP15_3746 0.87 -0.2
3,969,443 + HP15_3746 0.87 -0.2
3,969,450 + HP15_3746 0.87 +0.2
3,969,451 - HP15_3746 0.87 +0.3
3,969,488 - +0.7
3,969,533 - +1.3
3,969,567 - -1.0
3,969,646 + +1.1
3,969,730 - HP15_3747 0.16 +0.9
3,969,797 + HP15_3747 0.28 +1.3
3,969,804 + HP15_3747 0.29 +1.2
3,969,812 - HP15_3747 0.30 +2.1
3,969,878 + HP15_3747 0.42 +1.9
3,969,878 + HP15_3747 0.42 +0.8
3,969,899 + HP15_3747 0.45 +0.4
3,969,902 - HP15_3747 0.46 +1.0
3,969,907 - HP15_3747 0.47 +0.8
3,969,912 + HP15_3747 0.48 +1.9
3,969,979 - HP15_3747 0.59 +0.4
3,970,049 - HP15_3747 0.72 +1.9

Or see this region's nucleotide sequence