Strain Fitness in Marinobacter adhaerens HP15 around HP15_3713

Experiment: m.b. Benzethonium chloride 0.025 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3712 and HP15_3713 overlap by 4 nucleotidesHP15_3713 and HP15_3714 overlap by 4 nucleotides HP15_3712: HP15_3712 - exonuclease V subunit alpha, at 3,921,263 to 3,923,536 _3712 HP15_3713: HP15_3713 - exodeoxyribonuclease V, beta subunit, at 3,923,533 to 3,927,237 _3713 HP15_3714: HP15_3714 - exodeoxyribonuclease V, gamma subunit, at 3,927,234 to 3,930,860 _3714 Position (kb) 3923 3924 3925 3926 3927 3928Strain fitness (log2 ratio) -3 -2 -1 0 1at 3922.859 kb on + strand, within HP15_3712at 3923.176 kb on + strand, within HP15_3712at 3923.359 kb on - strandat 3923.380 kb on - strandat 3923.469 kb on + strandat 3923.469 kb on + strandat 3923.477 kb on - strandat 3923.477 kb on - strandat 3923.569 kb on - strandat 3923.769 kb on + strandat 3924.876 kb on - strand, within HP15_3713at 3925.395 kb on + strand, within HP15_3713at 3927.303 kb on - strandat 3928.082 kb on + strand, within HP15_3714

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM
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3,922,859 + HP15_3712 0.70 -3.2
3,923,176 + HP15_3712 0.84 -1.5
3,923,359 - +0.3
3,923,380 - +1.4
3,923,469 + -1.2
3,923,469 + -1.1
3,923,477 - +0.5
3,923,477 - -0.4
3,923,569 - -1.0
3,923,769 + -2.0
3,924,876 - HP15_3713 0.36 -1.8
3,925,395 + HP15_3713 0.50 -1.7
3,927,303 - -1.5
3,928,082 + HP15_3714 0.23 -1.4

Or see this region's nucleotide sequence