Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3631 and HP15_3632 are separated by 27 nucleotides HP15_3632 and HP15_3633 are separated by 8 nucleotides HP15_3633 and HP15_3635 are separated by 66 nucleotides HP15_3635 and HP15_3634 are separated by 14 nucleotides HP15_3634 and HP15_3636 are separated by 18 nucleotides
HP15_3631: HP15_3631 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s), at 3,825,148 to 3,827,748
_3631
HP15_3632: HP15_3632 - multicopper oxidase-like protein, at 3,827,776 to 3,828,459
_3632
HP15_3633: HP15_3633 - protein-S-isoprenylcysteine methyltransferase, at 3,828,468 to 3,828,869
_3633
HP15_3635: HP15_3635 - conserved hypothetical protein, at 3,828,936 to 3,829,709
_3635
HP15_3634: HP15_3634 - hypothetical protein, at 3,829,724 to 3,829,846
_3634
HP15_3636: HP15_3636 - protein containing molybdopterin oxidoreductase / molybdopterin dinucleotide-binding region, at 3,829,865 to 3,831,976
_3636
Position (kb)
3828
3829 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3827.556 kb on + strand at 3827.563 kb on + strand at 3827.565 kb on - strand at 3827.571 kb on - strand at 3827.571 kb on - strand at 3827.583 kb on + strand at 3827.686 kb on + strand at 3827.691 kb on + strand at 3827.694 kb on - strand at 3827.732 kb on + strand at 3827.732 kb on + strand at 3827.732 kb on + strand at 3827.782 kb on - strand at 3827.826 kb on - strand at 3827.925 kb on - strand, within HP15_3632 at 3827.932 kb on - strand, within HP15_3632 at 3827.934 kb on + strand, within HP15_3632 at 3827.939 kb on + strand, within HP15_3632 at 3827.947 kb on - strand, within HP15_3632 at 3828.026 kb on - strand, within HP15_3632 at 3828.128 kb on + strand, within HP15_3632 at 3828.128 kb on + strand, within HP15_3632 at 3828.128 kb on + strand, within HP15_3632 at 3828.136 kb on - strand, within HP15_3632 at 3828.136 kb on - strand, within HP15_3632 at 3828.315 kb on + strand, within HP15_3632 at 3828.315 kb on + strand, within HP15_3632 at 3828.344 kb on + strand, within HP15_3632 at 3828.424 kb on + strand at 3828.594 kb on - strand, within HP15_3633 at 3828.662 kb on + strand, within HP15_3633 at 3828.665 kb on - strand, within HP15_3633 at 3828.719 kb on + strand, within HP15_3633 at 3828.719 kb on + strand, within HP15_3633 at 3828.720 kb on + strand, within HP15_3633 at 3828.855 kb on + strand at 3828.858 kb on - strand at 3828.875 kb on - strand at 3828.971 kb on - strand at 3828.971 kb on - strand at 3829.186 kb on - strand, within HP15_3635 at 3829.205 kb on + strand, within HP15_3635 at 3829.253 kb on - strand, within HP15_3635 at 3829.294 kb on + strand, within HP15_3635 at 3829.294 kb on + strand, within HP15_3635 at 3829.302 kb on - strand, within HP15_3635 at 3829.302 kb on - strand, within HP15_3635 at 3829.321 kb on + strand, within HP15_3635 at 3829.329 kb on - strand, within HP15_3635 at 3829.372 kb on + strand, within HP15_3635 at 3829.415 kb on + strand, within HP15_3635 at 3829.454 kb on + strand, within HP15_3635 at 3829.492 kb on + strand, within HP15_3635 at 3829.492 kb on - strand, within HP15_3635 at 3829.545 kb on + strand, within HP15_3635 at 3829.550 kb on + strand, within HP15_3635 at 3829.563 kb on - strand, within HP15_3635 at 3829.563 kb on - strand, within HP15_3635 at 3829.565 kb on + strand, within HP15_3635 at 3829.831 kb on - strand, within HP15_3634 at 3829.833 kb on + strand, within HP15_3634
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 3,827,556 + -3.4 3,827,563 + +0.2 3,827,565 - -1.7 3,827,571 - +0.1 3,827,571 - -0.4 3,827,583 + -0.0 3,827,686 + +0.4 3,827,691 + +0.5 3,827,694 - +0.2 3,827,732 + +0.9 3,827,732 + +0.9 3,827,732 + +1.2 3,827,782 - -0.0 3,827,826 - +0.0 3,827,925 - HP15_3632 0.22 -0.8 3,827,932 - HP15_3632 0.23 -0.3 3,827,934 + HP15_3632 0.23 -2.5 3,827,939 + HP15_3632 0.24 -0.7 3,827,947 - HP15_3632 0.25 +0.4 3,828,026 - HP15_3632 0.37 +0.3 3,828,128 + HP15_3632 0.51 +0.2 3,828,128 + HP15_3632 0.51 -0.3 3,828,128 + HP15_3632 0.51 +0.2 3,828,136 - HP15_3632 0.53 -0.0 3,828,136 - HP15_3632 0.53 +0.4 3,828,315 + HP15_3632 0.79 -1.7 3,828,315 + HP15_3632 0.79 +0.3 3,828,344 + HP15_3632 0.83 +0.1 3,828,424 + +0.7 3,828,594 - HP15_3633 0.31 +0.3 3,828,662 + HP15_3633 0.48 +0.4 3,828,665 - HP15_3633 0.49 +0.9 3,828,719 + HP15_3633 0.62 +0.3 3,828,719 + HP15_3633 0.62 +2.9 3,828,720 + HP15_3633 0.63 +0.9 3,828,855 + +0.1 3,828,858 - -0.1 3,828,875 - +0.1 3,828,971 - +1.2 3,828,971 - -3.0 3,829,186 - HP15_3635 0.32 -2.1 3,829,205 + HP15_3635 0.35 +0.0 3,829,253 - HP15_3635 0.41 -0.0 3,829,294 + HP15_3635 0.46 -0.6 3,829,294 + HP15_3635 0.46 -0.5 3,829,302 - HP15_3635 0.47 +0.1 3,829,302 - HP15_3635 0.47 -0.3 3,829,321 + HP15_3635 0.50 +0.5 3,829,329 - HP15_3635 0.51 +0.8 3,829,372 + HP15_3635 0.56 +0.4 3,829,415 + HP15_3635 0.62 -2.4 3,829,454 + HP15_3635 0.67 -0.6 3,829,492 + HP15_3635 0.72 +0.1 3,829,492 - HP15_3635 0.72 +0.3 3,829,545 + HP15_3635 0.79 -0.5 3,829,550 + HP15_3635 0.79 +0.4 3,829,563 - HP15_3635 0.81 -0.1 3,829,563 - HP15_3635 0.81 -0.1 3,829,565 + HP15_3635 0.81 +0.1 3,829,831 - HP15_3634 0.87 -3.1 3,829,833 + HP15_3634 0.89 +0.9
Or see this region's nucleotide sequence