Strain Fitness in Marinobacter adhaerens HP15 around HP15_3607

Experiment: m.b. Benzethonium chloride 0.025 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3605 and HP15_3606 are separated by 235 nucleotidesHP15_3606 and HP15_3607 are separated by 184 nucleotidesHP15_3607 and HP15_3608 are separated by 320 nucleotides HP15_3605: HP15_3605 - conserved hypothetical protein, at 3,800,136 to 3,801,955 _3605 HP15_3606: HP15_3606 - abortive infection protein-like protein, at 3,802,191 to 3,802,613 _3606 HP15_3607: HP15_3607 - DEAD/DEAH box helicase domain protein, at 3,802,798 to 3,804,120 _3607 HP15_3608: HP15_3608 - membrane protein containing redoxin domain, at 3,804,441 to 3,805,256 _3608 Position (kb) 3802 3803 3804 3805Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3801.798 kb on - strandat 3801.858 kb on + strandat 3801.909 kb on + strandat 3801.966 kb on - strandat 3801.971 kb on - strandat 3802.085 kb on - strandat 3802.214 kb on - strandat 3802.257 kb on + strand, within HP15_3606at 3802.257 kb on + strand, within HP15_3606at 3802.257 kb on + strand, within HP15_3606at 3802.257 kb on + strand, within HP15_3606at 3802.257 kb on + strand, within HP15_3606at 3802.257 kb on + strand, within HP15_3606at 3802.262 kb on + strand, within HP15_3606at 3802.265 kb on - strand, within HP15_3606at 3802.265 kb on - strand, within HP15_3606at 3802.392 kb on + strand, within HP15_3606at 3802.418 kb on - strand, within HP15_3606at 3802.435 kb on + strand, within HP15_3606at 3802.443 kb on - strand, within HP15_3606at 3802.490 kb on + strand, within HP15_3606at 3802.609 kb on + strandat 3802.617 kb on - strandat 3802.629 kb on + strandat 3802.629 kb on + strandat 3802.637 kb on - strandat 3802.802 kb on - strandat 3802.805 kb on + strandat 3802.833 kb on + strandat 3802.961 kb on + strand, within HP15_3607at 3802.961 kb on + strand, within HP15_3607at 3802.964 kb on - strand, within HP15_3607at 3802.969 kb on - strand, within HP15_3607at 3802.969 kb on - strand, within HP15_3607at 3802.969 kb on - strand, within HP15_3607at 3802.998 kb on + strand, within HP15_3607at 3802.998 kb on + strand, within HP15_3607at 3803.006 kb on - strand, within HP15_3607at 3803.078 kb on + strand, within HP15_3607at 3803.164 kb on - strand, within HP15_3607at 3803.164 kb on - strand, within HP15_3607at 3803.166 kb on + strand, within HP15_3607at 3803.174 kb on - strand, within HP15_3607at 3803.242 kb on + strand, within HP15_3607at 3803.250 kb on - strand, within HP15_3607at 3803.285 kb on + strand, within HP15_3607at 3803.293 kb on - strand, within HP15_3607at 3803.313 kb on - strand, within HP15_3607at 3803.399 kb on - strand, within HP15_3607at 3803.432 kb on + strand, within HP15_3607at 3803.511 kb on + strand, within HP15_3607at 3803.531 kb on + strand, within HP15_3607at 3803.665 kb on - strand, within HP15_3607at 3803.693 kb on - strand, within HP15_3607at 3803.728 kb on + strand, within HP15_3607at 3803.757 kb on - strand, within HP15_3607at 3803.764 kb on - strand, within HP15_3607at 3803.803 kb on - strand, within HP15_3607at 3803.805 kb on - strand, within HP15_3607at 3803.806 kb on - strand, within HP15_3607at 3803.851 kb on + strand, within HP15_3607at 3803.851 kb on + strand, within HP15_3607at 3803.851 kb on + strand, within HP15_3607at 3803.859 kb on - strand, within HP15_3607at 3803.859 kb on - strand, within HP15_3607at 3803.859 kb on - strand, within HP15_3607at 3803.871 kb on + strand, within HP15_3607at 3803.891 kb on - strand, within HP15_3607at 3803.924 kb on + strand, within HP15_3607at 3803.931 kb on - strand, within HP15_3607at 3803.947 kb on + strand, within HP15_3607at 3803.953 kb on + strand, within HP15_3607at 3803.980 kb on + strand, within HP15_3607at 3804.001 kb on + strandat 3804.039 kb on + strandat 3804.066 kb on + strandat 3804.074 kb on - strandat 3804.074 kb on - strandat 3804.085 kb on - strandat 3804.085 kb on - strandat 3804.085 kb on - strandat 3804.282 kb on + strandat 3804.282 kb on + strandat 3804.290 kb on - strandat 3804.290 kb on - strandat 3804.308 kb on - strandat 3804.314 kb on - strandat 3804.329 kb on - strandat 3804.329 kb on - strandat 3804.329 kb on - strandat 3804.331 kb on + strandat 3804.459 kb on - strandat 3804.459 kb on - strandat 3804.500 kb on - strandat 3804.689 kb on + strand, within HP15_3608at 3804.689 kb on + strand, within HP15_3608at 3804.696 kb on + strand, within HP15_3608at 3804.697 kb on - strand, within HP15_3608at 3804.697 kb on - strand, within HP15_3608at 3804.745 kb on - strand, within HP15_3608at 3804.791 kb on + strand, within HP15_3608at 3804.799 kb on - strand, within HP15_3608at 3804.799 kb on - strand, within HP15_3608at 3804.799 kb on - strand, within HP15_3608at 3804.814 kb on + strand, within HP15_3608at 3804.814 kb on + strand, within HP15_3608at 3804.814 kb on + strand, within HP15_3608at 3804.822 kb on - strand, within HP15_3608at 3804.822 kb on - strand, within HP15_3608at 3804.822 kb on - strand, within HP15_3608at 3804.822 kb on - strand, within HP15_3608at 3804.822 kb on - strand, within HP15_3608at 3804.822 kb on - strand, within HP15_3608at 3804.869 kb on + strand, within HP15_3608at 3804.874 kb on + strand, within HP15_3608at 3804.882 kb on + strand, within HP15_3608at 3804.929 kb on + strand, within HP15_3608at 3804.959 kb on - strand, within HP15_3608at 3804.992 kb on - strand, within HP15_3608at 3805.026 kb on - strand, within HP15_3608at 3805.045 kb on - strand, within HP15_3608

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM
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3,801,798 - -3.0
3,801,858 + +1.0
3,801,909 + -0.3
3,801,966 - -0.2
3,801,971 - -0.0
3,802,085 - +0.3
3,802,214 - -0.4
3,802,257 + HP15_3606 0.16 -0.3
3,802,257 + HP15_3606 0.16 -0.3
3,802,257 + HP15_3606 0.16 +0.1
3,802,257 + HP15_3606 0.16 +0.0
3,802,257 + HP15_3606 0.16 +0.1
3,802,257 + HP15_3606 0.16 -1.3
3,802,262 + HP15_3606 0.17 +3.2
3,802,265 - HP15_3606 0.17 +0.1
3,802,265 - HP15_3606 0.17 -0.9
3,802,392 + HP15_3606 0.48 -0.1
3,802,418 - HP15_3606 0.54 +1.9
3,802,435 + HP15_3606 0.58 +0.8
3,802,443 - HP15_3606 0.60 +0.7
3,802,490 + HP15_3606 0.71 +0.3
3,802,609 + -0.2
3,802,617 - -1.7
3,802,629 + +2.3
3,802,629 + -0.0
3,802,637 - +0.4
3,802,802 - +0.1
3,802,805 + +1.0
3,802,833 + +0.9
3,802,961 + HP15_3607 0.12 +0.5
3,802,961 + HP15_3607 0.12 -0.3
3,802,964 - HP15_3607 0.13 +0.9
3,802,969 - HP15_3607 0.13 +0.2
3,802,969 - HP15_3607 0.13 +0.7
3,802,969 - HP15_3607 0.13 -1.1
3,802,998 + HP15_3607 0.15 +0.6
3,802,998 + HP15_3607 0.15 +0.7
3,803,006 - HP15_3607 0.16 +1.2
3,803,078 + HP15_3607 0.21 +1.1
3,803,164 - HP15_3607 0.28 +0.0
3,803,164 - HP15_3607 0.28 +0.4
3,803,166 + HP15_3607 0.28 +1.3
3,803,174 - HP15_3607 0.28 +0.2
3,803,242 + HP15_3607 0.34 -0.2
3,803,250 - HP15_3607 0.34 +1.3
3,803,285 + HP15_3607 0.37 +1.9
3,803,293 - HP15_3607 0.37 +1.1
3,803,313 - HP15_3607 0.39 -0.0
3,803,399 - HP15_3607 0.45 +1.0
3,803,432 + HP15_3607 0.48 +0.3
3,803,511 + HP15_3607 0.54 -0.1
3,803,531 + HP15_3607 0.55 +0.5
3,803,665 - HP15_3607 0.66 -0.5
3,803,693 - HP15_3607 0.68 +0.4
3,803,728 + HP15_3607 0.70 +0.3
3,803,757 - HP15_3607 0.72 -0.4
3,803,764 - HP15_3607 0.73 +0.6
3,803,803 - HP15_3607 0.76 +0.4
3,803,805 - HP15_3607 0.76 +0.3
3,803,806 - HP15_3607 0.76 +0.9
3,803,851 + HP15_3607 0.80 +0.3
3,803,851 + HP15_3607 0.80 -1.2
3,803,851 + HP15_3607 0.80 +1.9
3,803,859 - HP15_3607 0.80 +0.4
3,803,859 - HP15_3607 0.80 +0.6
3,803,859 - HP15_3607 0.80 +1.1
3,803,871 + HP15_3607 0.81 +0.2
3,803,891 - HP15_3607 0.83 +0.3
3,803,924 + HP15_3607 0.85 +0.1
3,803,931 - HP15_3607 0.86 -0.4
3,803,947 + HP15_3607 0.87 +0.2
3,803,953 + HP15_3607 0.87 +0.3
3,803,980 + HP15_3607 0.89 +1.8
3,804,001 + -0.5
3,804,039 + +0.1
3,804,066 + +0.1
3,804,074 - +0.3
3,804,074 - +0.2
3,804,085 - +0.6
3,804,085 - +1.2
3,804,085 - +0.8
3,804,282 + +1.5
3,804,282 + +1.0
3,804,290 - +0.3
3,804,290 - -0.9
3,804,308 - +0.1
3,804,314 - +1.9
3,804,329 - +0.5
3,804,329 - -1.9
3,804,329 - -0.3
3,804,331 + +0.5
3,804,459 - +0.3
3,804,459 - -0.2
3,804,500 - -1.1
3,804,689 + HP15_3608 0.30 +0.5
3,804,689 + HP15_3608 0.30 -0.0
3,804,696 + HP15_3608 0.31 +0.5
3,804,697 - HP15_3608 0.31 +0.8
3,804,697 - HP15_3608 0.31 +0.4
3,804,745 - HP15_3608 0.37 +0.5
3,804,791 + HP15_3608 0.43 +0.1
3,804,799 - HP15_3608 0.44 +0.9
3,804,799 - HP15_3608 0.44 -0.0
3,804,799 - HP15_3608 0.44 +1.7
3,804,814 + HP15_3608 0.46 -0.5
3,804,814 + HP15_3608 0.46 +1.0
3,804,814 + HP15_3608 0.46 +0.4
3,804,822 - HP15_3608 0.47 +0.0
3,804,822 - HP15_3608 0.47 +0.2
3,804,822 - HP15_3608 0.47 -0.2
3,804,822 - HP15_3608 0.47 -0.1
3,804,822 - HP15_3608 0.47 +0.6
3,804,822 - HP15_3608 0.47 -0.2
3,804,869 + HP15_3608 0.52 +0.5
3,804,874 + HP15_3608 0.53 -0.8
3,804,882 + HP15_3608 0.54 -1.4
3,804,929 + HP15_3608 0.60 -0.6
3,804,959 - HP15_3608 0.63 -0.8
3,804,992 - HP15_3608 0.68 +0.1
3,805,026 - HP15_3608 0.72 +0.8
3,805,045 - HP15_3608 0.74 +0.4

Or see this region's nucleotide sequence