Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3363 and HP15_3364 overlap by 9 nucleotides HP15_3364 and HP15_3365 are separated by 35 nucleotides HP15_3365 and HP15_3366 overlap by 20 nucleotides
HP15_3363: HP15_3363 - dihydroxy-acid dehydratase, at 3,526,393 to 3,528,081
_3363
HP15_3364: HP15_3364 - hypothetical protein, at 3,528,073 to 3,528,258
_3364
HP15_3365: HP15_3365 - D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase, at 3,528,294 to 3,530,711
_3365
HP15_3366: HP15_3366 - cation-transporting ATPase, E1-E2 family protein, at 3,530,692 to 3,533,418
_3366
Position (kb)
3528
3529
3530
3531 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3527.398 kb on - strand, within HP15_3363 at 3527.457 kb on + strand, within HP15_3363 at 3527.478 kb on + strand, within HP15_3363 at 3527.523 kb on + strand, within HP15_3363 at 3527.527 kb on - strand, within HP15_3363 at 3527.629 kb on + strand, within HP15_3363 at 3527.631 kb on - strand, within HP15_3363 at 3527.647 kb on + strand, within HP15_3363 at 3527.678 kb on + strand, within HP15_3363 at 3527.763 kb on + strand, within HP15_3363 at 3527.793 kb on + strand, within HP15_3363 at 3527.929 kb on - strand at 3527.995 kb on - strand at 3528.073 kb on - strand at 3528.333 kb on + strand at 3528.369 kb on - strand at 3528.389 kb on - strand at 3528.468 kb on + strand at 3528.480 kb on + strand at 3528.494 kb on - strand at 3528.508 kb on - strand at 3528.534 kb on + strand at 3528.576 kb on + strand, within HP15_3365 at 3528.725 kb on - strand, within HP15_3365 at 3528.725 kb on - strand, within HP15_3365 at 3528.996 kb on + strand, within HP15_3365 at 3529.043 kb on - strand, within HP15_3365 at 3529.043 kb on - strand, within HP15_3365 at 3529.199 kb on + strand, within HP15_3365 at 3529.202 kb on - strand, within HP15_3365 at 3529.213 kb on + strand, within HP15_3365 at 3529.281 kb on + strand, within HP15_3365 at 3529.287 kb on + strand, within HP15_3365 at 3529.287 kb on + strand, within HP15_3365 at 3529.316 kb on - strand, within HP15_3365 at 3529.373 kb on + strand, within HP15_3365 at 3529.401 kb on - strand, within HP15_3365 at 3529.411 kb on - strand, within HP15_3365 at 3529.435 kb on + strand, within HP15_3365 at 3529.490 kb on - strand, within HP15_3365 at 3529.561 kb on - strand, within HP15_3365 at 3529.591 kb on - strand, within HP15_3365 at 3529.635 kb on - strand, within HP15_3365 at 3529.642 kb on - strand, within HP15_3365 at 3529.924 kb on + strand, within HP15_3365 at 3529.932 kb on - strand, within HP15_3365 at 3529.994 kb on - strand, within HP15_3365 at 3530.152 kb on - strand, within HP15_3365 at 3530.251 kb on + strand, within HP15_3365 at 3530.322 kb on + strand, within HP15_3365 at 3530.322 kb on + strand, within HP15_3365 at 3530.365 kb on - strand, within HP15_3365 at 3530.434 kb on + strand, within HP15_3365 at 3530.627 kb on - strand at 3530.672 kb on - strand at 3530.688 kb on - strand at 3530.699 kb on + strand at 3530.708 kb on - strand at 3530.708 kb on - strand at 3530.710 kb on + strand at 3530.713 kb on - strand at 3530.823 kb on + strand at 3530.899 kb on + strand at 3530.907 kb on - strand at 3530.907 kb on - strand at 3530.926 kb on - strand at 3530.995 kb on + strand, within HP15_3366 at 3530.995 kb on + strand, within HP15_3366 at 3530.995 kb on + strand, within HP15_3366 at 3530.995 kb on + strand, within HP15_3366 at 3531.003 kb on - strand, within HP15_3366 at 3531.003 kb on - strand, within HP15_3366 at 3531.003 kb on - strand, within HP15_3366 at 3531.015 kb on - strand, within HP15_3366 at 3531.032 kb on + strand, within HP15_3366 at 3531.040 kb on - strand, within HP15_3366 at 3531.040 kb on - strand, within HP15_3366 at 3531.040 kb on - strand, within HP15_3366 at 3531.040 kb on - strand, within HP15_3366 at 3531.045 kb on - strand, within HP15_3366 at 3531.137 kb on - strand, within HP15_3366 at 3531.179 kb on + strand, within HP15_3366 at 3531.211 kb on + strand, within HP15_3366 at 3531.243 kb on + strand, within HP15_3366 at 3531.244 kb on + strand, within HP15_3366 at 3531.290 kb on + strand, within HP15_3366 at 3531.303 kb on + strand, within HP15_3366 at 3531.331 kb on + strand, within HP15_3366 at 3531.331 kb on + strand, within HP15_3366 at 3531.339 kb on - strand, within HP15_3366 at 3531.339 kb on - strand, within HP15_3366 at 3531.371 kb on - strand, within HP15_3366 at 3531.430 kb on + strand, within HP15_3366 at 3531.456 kb on - strand, within HP15_3366 at 3531.517 kb on - strand, within HP15_3366 at 3531.588 kb on - strand, within HP15_3366
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 3,527,398 - HP15_3363 0.60 -0.7 3,527,457 + HP15_3363 0.63 +0.2 3,527,478 + HP15_3363 0.64 -1.5 3,527,523 + HP15_3363 0.67 +0.4 3,527,527 - HP15_3363 0.67 +0.2 3,527,629 + HP15_3363 0.73 +2.5 3,527,631 - HP15_3363 0.73 +0.2 3,527,647 + HP15_3363 0.74 -1.1 3,527,678 + HP15_3363 0.76 +0.2 3,527,763 + HP15_3363 0.81 +0.5 3,527,793 + HP15_3363 0.83 +0.0 3,527,929 - +0.2 3,527,995 - +0.7 3,528,073 - -0.3 3,528,333 + -0.6 3,528,369 - +1.2 3,528,389 - +1.1 3,528,468 + -0.2 3,528,480 + -0.2 3,528,494 - -1.5 3,528,508 - +0.4 3,528,534 + +0.6 3,528,576 + HP15_3365 0.12 -2.3 3,528,725 - HP15_3365 0.18 -3.2 3,528,725 - HP15_3365 0.18 -0.5 3,528,996 + HP15_3365 0.29 -1.1 3,529,043 - HP15_3365 0.31 -2.3 3,529,043 - HP15_3365 0.31 -0.2 3,529,199 + HP15_3365 0.37 -0.1 3,529,202 - HP15_3365 0.38 -0.2 3,529,213 + HP15_3365 0.38 +0.1 3,529,281 + HP15_3365 0.41 -0.6 3,529,287 + HP15_3365 0.41 -2.8 3,529,287 + HP15_3365 0.41 -0.5 3,529,316 - HP15_3365 0.42 -0.1 3,529,373 + HP15_3365 0.45 +0.2 3,529,401 - HP15_3365 0.46 +0.8 3,529,411 - HP15_3365 0.46 -0.3 3,529,435 + HP15_3365 0.47 -0.0 3,529,490 - HP15_3365 0.49 +0.2 3,529,561 - HP15_3365 0.52 +0.1 3,529,591 - HP15_3365 0.54 +0.7 3,529,635 - HP15_3365 0.55 -0.9 3,529,642 - HP15_3365 0.56 -0.8 3,529,924 + HP15_3365 0.67 -0.6 3,529,932 - HP15_3365 0.68 -0.6 3,529,994 - HP15_3365 0.70 -0.4 3,530,152 - HP15_3365 0.77 +0.1 3,530,251 + HP15_3365 0.81 -0.1 3,530,322 + HP15_3365 0.84 -0.1 3,530,322 + HP15_3365 0.84 +0.4 3,530,365 - HP15_3365 0.86 -0.5 3,530,434 + HP15_3365 0.89 -0.7 3,530,627 - -0.6 3,530,672 - +1.5 3,530,688 - +1.3 3,530,699 + +0.1 3,530,708 - -2.5 3,530,708 - -0.1 3,530,710 + +0.1 3,530,713 - +0.7 3,530,823 + -0.4 3,530,899 + +0.9 3,530,907 - +0.9 3,530,907 - +0.4 3,530,926 - +2.2 3,530,995 + HP15_3366 0.11 +0.2 3,530,995 + HP15_3366 0.11 -0.3 3,530,995 + HP15_3366 0.11 +0.6 3,530,995 + HP15_3366 0.11 -0.1 3,531,003 - HP15_3366 0.11 -0.6 3,531,003 - HP15_3366 0.11 +0.3 3,531,003 - HP15_3366 0.11 +1.0 3,531,015 - HP15_3366 0.12 +0.2 3,531,032 + HP15_3366 0.12 -1.8 3,531,040 - HP15_3366 0.13 +0.4 3,531,040 - HP15_3366 0.13 +0.0 3,531,040 - HP15_3366 0.13 +0.0 3,531,040 - HP15_3366 0.13 -0.6 3,531,045 - HP15_3366 0.13 -3.3 3,531,137 - HP15_3366 0.16 -0.4 3,531,179 + HP15_3366 0.18 -1.7 3,531,211 + HP15_3366 0.19 +1.5 3,531,243 + HP15_3366 0.20 +0.3 3,531,244 + HP15_3366 0.20 +0.4 3,531,290 + HP15_3366 0.22 -0.1 3,531,303 + HP15_3366 0.22 +0.1 3,531,331 + HP15_3366 0.23 -3.0 3,531,331 + HP15_3366 0.23 +0.5 3,531,339 - HP15_3366 0.24 +0.8 3,531,339 - HP15_3366 0.24 +0.6 3,531,371 - HP15_3366 0.25 -2.1 3,531,430 + HP15_3366 0.27 +0.1 3,531,456 - HP15_3366 0.28 +0.1 3,531,517 - HP15_3366 0.30 +0.1 3,531,588 - HP15_3366 0.33 -0.2
Or see this region's nucleotide sequence