Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_331 and HP15_332 are separated by 61 nucleotides HP15_332 and HP15_333 are separated by 179 nucleotides HP15_333 and HP15_334 overlap by 17 nucleotides HP15_334 and HP15_335 are separated by 62 nucleotides HP15_335 and HP15_336 are separated by 40 nucleotides
HP15_331: HP15_331 - glutamyl-Q tRNA(Asp) synthetase, at 328,825 to 329,697
_331
HP15_332: HP15_332 - transcriptional regulator, TraR/DksA family, at 329,759 to 330,199
_332
HP15_333: HP15_333 - sugar fermentation stimulation protein-like protein, at 330,379 to 331,110
_333
HP15_334: HP15_334 - Rieske (2Fe-2S) domain protein, at 331,094 to 331,399
_334
HP15_335: HP15_335 - uncharacterized conserved protein UCP029688, pentapeptide, at 331,462 to 331,830
_335
HP15_336: HP15_336 - conserved hypothetical protein, at 331,871 to 333,457
_336
Position (kb) 330
331
332 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 329.414 kb on + strand, within HP15_331 at 329.449 kb on + strand, within HP15_331 at 329.552 kb on - strand, within HP15_331 at 329.562 kb on + strand, within HP15_331 at 329.664 kb on + strand at 330.117 kb on + strand, within HP15_332 at 330.280 kb on - strand at 330.339 kb on + strand at 330.423 kb on + strand at 330.541 kb on - strand, within HP15_333 at 330.575 kb on - strand, within HP15_333 at 330.583 kb on - strand, within HP15_333 at 330.594 kb on - strand, within HP15_333 at 330.604 kb on + strand, within HP15_333 at 330.612 kb on - strand, within HP15_333 at 330.612 kb on - strand, within HP15_333 at 330.663 kb on - strand, within HP15_333 at 330.697 kb on - strand, within HP15_333 at 330.748 kb on - strand, within HP15_333 at 330.859 kb on - strand, within HP15_333 at 330.871 kb on - strand, within HP15_333 at 330.904 kb on + strand, within HP15_333 at 330.904 kb on + strand, within HP15_333 at 331.011 kb on - strand, within HP15_333 at 331.146 kb on - strand, within HP15_334 at 331.197 kb on + strand, within HP15_334 at 331.205 kb on - strand, within HP15_334 at 331.266 kb on + strand, within HP15_334 at 331.283 kb on + strand, within HP15_334 at 331.283 kb on + strand, within HP15_334 at 331.284 kb on - strand, within HP15_334 at 331.318 kb on - strand, within HP15_334 at 331.382 kb on - strand at 331.448 kb on + strand at 331.637 kb on - strand, within HP15_335 at 331.714 kb on + strand, within HP15_335 at 331.808 kb on - strand at 331.895 kb on + strand at 331.895 kb on + strand at 331.895 kb on + strand at 331.903 kb on - strand at 331.920 kb on + strand at 331.940 kb on + strand at 331.948 kb on - strand at 331.948 kb on - strand at 331.948 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 329,414 + HP15_331 0.67 -0.4 329,449 + HP15_331 0.71 -2.3 329,552 - HP15_331 0.83 -0.9 329,562 + HP15_331 0.84 -0.2 329,664 + -0.0 330,117 + HP15_332 0.81 -0.2 330,280 - -1.5 330,339 + -1.5 330,423 + +0.6 330,541 - HP15_333 0.22 +1.5 330,575 - HP15_333 0.27 +1.2 330,583 - HP15_333 0.28 -0.4 330,594 - HP15_333 0.29 +0.6 330,604 + HP15_333 0.31 +0.0 330,612 - HP15_333 0.32 +0.4 330,612 - HP15_333 0.32 +0.8 330,663 - HP15_333 0.39 +0.2 330,697 - HP15_333 0.43 +0.7 330,748 - HP15_333 0.50 +0.2 330,859 - HP15_333 0.66 +0.0 330,871 - HP15_333 0.67 +0.6 330,904 + HP15_333 0.72 -1.1 330,904 + HP15_333 0.72 +0.1 331,011 - HP15_333 0.86 +0.5 331,146 - HP15_334 0.17 -2.6 331,197 + HP15_334 0.34 +0.4 331,205 - HP15_334 0.36 -0.2 331,266 + HP15_334 0.56 +0.1 331,283 + HP15_334 0.62 +0.6 331,283 + HP15_334 0.62 +0.4 331,284 - HP15_334 0.62 -3.0 331,318 - HP15_334 0.73 -0.2 331,382 - +0.8 331,448 + +0.3 331,637 - HP15_335 0.47 -0.3 331,714 + HP15_335 0.68 +0.8 331,808 - -1.6 331,895 + -1.4 331,895 + -0.1 331,895 + +1.1 331,903 - +0.4 331,920 + -0.9 331,940 + +0.6 331,948 - -0.5 331,948 - -0.3 331,948 - +0.5
Or see this region's nucleotide sequence