Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3177 and HP15_3178 are separated by 70 nucleotides HP15_3178 and HP15_3179 are separated by 117 nucleotides HP15_3179 and HP15_3180 are separated by 157 nucleotides
HP15_3177: HP15_3177 - conserved hypothetical protein, secreted, at 3,330,645 to 3,331,766
_3177
HP15_3178: HP15_3178 - conserved hypothetical protein, at 3,331,837 to 3,333,069
_3178
HP15_3179: HP15_3179 - protein containing DUF1826, at 3,333,187 to 3,333,822
_3179
HP15_3180: HP15_3180 - ABC transporter, ATP-binding protein, at 3,333,980 to 3,334,651
_3180
Position (kb)
3331
3332
3333
3334 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3330.901 kb on - strand, within HP15_3177 at 3331.178 kb on + strand, within HP15_3177 at 3331.218 kb on + strand, within HP15_3177 at 3331.218 kb on + strand, within HP15_3177 at 3331.226 kb on - strand, within HP15_3177 at 3331.260 kb on - strand, within HP15_3177 at 3331.280 kb on - strand at 3331.299 kb on + strand, within HP15_3177 at 3331.314 kb on + strand, within HP15_3177 at 3331.561 kb on + strand, within HP15_3177 at 3331.569 kb on - strand, within HP15_3177 at 3331.571 kb on - strand, within HP15_3177 at 3331.593 kb on - strand, within HP15_3177 at 3331.595 kb on + strand, within HP15_3177 at 3331.603 kb on - strand, within HP15_3177 at 3331.610 kb on + strand, within HP15_3177 at 3331.630 kb on - strand, within HP15_3177 at 3331.728 kb on - strand at 3331.772 kb on - strand at 3331.772 kb on - strand at 3331.825 kb on + strand at 3331.971 kb on - strand, within HP15_3178 at 3332.043 kb on - strand, within HP15_3178 at 3332.061 kb on - strand, within HP15_3178 at 3332.066 kb on - strand, within HP15_3178 at 3332.093 kb on + strand, within HP15_3178 at 3332.109 kb on + strand, within HP15_3178 at 3332.161 kb on - strand, within HP15_3178 at 3332.163 kb on + strand, within HP15_3178 at 3332.166 kb on - strand, within HP15_3178 at 3332.173 kb on + strand, within HP15_3178 at 3332.173 kb on + strand, within HP15_3178 at 3332.181 kb on - strand, within HP15_3178 at 3332.181 kb on - strand, within HP15_3178 at 3332.181 kb on - strand, within HP15_3178 at 3332.190 kb on + strand, within HP15_3178 at 3332.201 kb on + strand, within HP15_3178 at 3332.268 kb on + strand, within HP15_3178 at 3332.289 kb on + strand, within HP15_3178 at 3332.302 kb on - strand, within HP15_3178 at 3332.303 kb on + strand, within HP15_3178 at 3332.313 kb on + strand, within HP15_3178 at 3332.329 kb on - strand, within HP15_3178 at 3332.357 kb on + strand, within HP15_3178 at 3332.406 kb on + strand, within HP15_3178 at 3332.459 kb on - strand, within HP15_3178 at 3332.609 kb on + strand, within HP15_3178 at 3332.669 kb on - strand, within HP15_3178 at 3332.758 kb on - strand, within HP15_3178 at 3332.818 kb on - strand, within HP15_3178 at 3332.818 kb on - strand, within HP15_3178 at 3332.888 kb on + strand, within HP15_3178 at 3332.934 kb on + strand, within HP15_3178 at 3332.950 kb on + strand at 3332.965 kb on - strand at 3332.972 kb on - strand at 3332.996 kb on - strand at 3333.007 kb on + strand at 3333.069 kb on + strand at 3333.092 kb on + strand at 3333.224 kb on + strand at 3333.224 kb on + strand at 3333.360 kb on + strand, within HP15_3179 at 3333.478 kb on - strand, within HP15_3179 at 3333.535 kb on - strand, within HP15_3179 at 3333.580 kb on + strand, within HP15_3179 at 3333.626 kb on + strand, within HP15_3179 at 3333.626 kb on + strand, within HP15_3179 at 3333.703 kb on - strand, within HP15_3179 at 3333.729 kb on + strand, within HP15_3179 at 3333.851 kb on + strand at 3333.859 kb on - strand at 3333.859 kb on - strand at 3334.002 kb on - strand at 3334.016 kb on - strand at 3334.040 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 3,330,901 - HP15_3177 0.23 +0.3 3,331,178 + HP15_3177 0.48 -0.2 3,331,218 + HP15_3177 0.51 -0.6 3,331,218 + HP15_3177 0.51 +0.1 3,331,226 - HP15_3177 0.52 -1.0 3,331,260 - HP15_3177 0.55 -3.3 3,331,280 - -0.5 3,331,299 + HP15_3177 0.58 +0.1 3,331,314 + HP15_3177 0.60 +2.3 3,331,561 + HP15_3177 0.82 -0.2 3,331,569 - HP15_3177 0.82 -0.0 3,331,571 - HP15_3177 0.83 +0.2 3,331,593 - HP15_3177 0.84 +0.2 3,331,595 + HP15_3177 0.85 +0.2 3,331,603 - HP15_3177 0.85 -0.6 3,331,610 + HP15_3177 0.86 -1.1 3,331,630 - HP15_3177 0.88 +0.2 3,331,728 - +0.1 3,331,772 - -0.8 3,331,772 - -0.6 3,331,825 + +0.0 3,331,971 - HP15_3178 0.11 -1.3 3,332,043 - HP15_3178 0.17 +0.0 3,332,061 - HP15_3178 0.18 -0.1 3,332,066 - HP15_3178 0.19 +0.5 3,332,093 + HP15_3178 0.21 -0.6 3,332,109 + HP15_3178 0.22 -1.6 3,332,161 - HP15_3178 0.26 +0.6 3,332,163 + HP15_3178 0.26 +0.1 3,332,166 - HP15_3178 0.27 -0.7 3,332,173 + HP15_3178 0.27 +0.7 3,332,173 + HP15_3178 0.27 -0.0 3,332,181 - HP15_3178 0.28 -0.2 3,332,181 - HP15_3178 0.28 -1.7 3,332,181 - HP15_3178 0.28 -1.1 3,332,190 + HP15_3178 0.29 -0.9 3,332,201 + HP15_3178 0.30 +0.7 3,332,268 + HP15_3178 0.35 +0.4 3,332,289 + HP15_3178 0.37 +0.1 3,332,302 - HP15_3178 0.38 -0.5 3,332,303 + HP15_3178 0.38 -1.1 3,332,313 + HP15_3178 0.39 -0.3 3,332,329 - HP15_3178 0.40 -0.1 3,332,357 + HP15_3178 0.42 +0.5 3,332,406 + HP15_3178 0.46 -2.7 3,332,459 - HP15_3178 0.50 -1.4 3,332,609 + HP15_3178 0.63 +0.0 3,332,669 - HP15_3178 0.67 -2.3 3,332,758 - HP15_3178 0.75 -0.4 3,332,818 - HP15_3178 0.80 -0.8 3,332,818 - HP15_3178 0.80 +0.0 3,332,888 + HP15_3178 0.85 -0.7 3,332,934 + HP15_3178 0.89 +0.4 3,332,950 + -1.1 3,332,965 - +1.0 3,332,972 - +0.6 3,332,996 - -0.0 3,333,007 + -0.2 3,333,069 + -0.8 3,333,092 + -1.7 3,333,224 + +1.7 3,333,224 + +1.4 3,333,360 + HP15_3179 0.27 -1.1 3,333,478 - HP15_3179 0.46 +0.4 3,333,535 - HP15_3179 0.55 +0.3 3,333,580 + HP15_3179 0.62 +0.7 3,333,626 + HP15_3179 0.69 -2.2 3,333,626 + HP15_3179 0.69 -1.8 3,333,703 - HP15_3179 0.81 -0.3 3,333,729 + HP15_3179 0.85 -2.1 3,333,851 + -0.1 3,333,859 - +0.9 3,333,859 - -0.0 3,334,002 - -3.0 3,334,016 - -2.5 3,334,040 - +0.0
Or see this region's nucleotide sequence