Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3111 and HP15_3112 are separated by 302 nucleotides HP15_3112 and HP15_3113 are separated by 77 nucleotides
HP15_3111: HP15_3111 - hypothetical protein, at 3,261,652 to 3,262,359
_3111
HP15_3112: HP15_3112 - beta-lactamase domain protein, at 3,262,662 to 3,263,627
_3112
HP15_3113: HP15_3113 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein, at 3,263,705 to 3,264,511
_3113
Position (kb)
3262
3263
3264 Strain fitness (log2 ratio)
-2
-1
0
1 at 3261.753 kb on + strand, within HP15_3111 at 3261.789 kb on + strand, within HP15_3111 at 3262.142 kb on + strand, within HP15_3111 at 3262.142 kb on + strand, within HP15_3111 at 3262.189 kb on + strand, within HP15_3111 at 3262.189 kb on + strand, within HP15_3111 at 3262.382 kb on + strand at 3262.389 kb on + strand at 3262.390 kb on - strand at 3262.580 kb on - strand at 3262.610 kb on + strand at 3262.624 kb on - strand at 3262.807 kb on + strand, within HP15_3112 at 3262.885 kb on + strand, within HP15_3112 at 3262.917 kb on + strand, within HP15_3112 at 3262.960 kb on - strand, within HP15_3112 at 3263.045 kb on + strand, within HP15_3112 at 3263.045 kb on + strand, within HP15_3112 at 3263.060 kb on + strand, within HP15_3112 at 3263.096 kb on - strand, within HP15_3112 at 3263.098 kb on + strand, within HP15_3112 at 3263.179 kb on - strand, within HP15_3112 at 3263.224 kb on + strand, within HP15_3112 at 3263.267 kb on - strand, within HP15_3112 at 3263.271 kb on + strand, within HP15_3112 at 3263.271 kb on + strand, within HP15_3112 at 3263.286 kb on - strand, within HP15_3112 at 3263.369 kb on + strand, within HP15_3112 at 3263.412 kb on + strand, within HP15_3112 at 3263.464 kb on + strand, within HP15_3112 at 3263.501 kb on + strand, within HP15_3112 at 3263.501 kb on + strand, within HP15_3112 at 3263.509 kb on - strand, within HP15_3112 at 3263.515 kb on - strand, within HP15_3112 at 3263.523 kb on - strand, within HP15_3112 at 3263.525 kb on + strand, within HP15_3112 at 3263.567 kb on - strand at 3263.567 kb on - strand at 3263.596 kb on - strand at 3263.624 kb on + strand at 3263.664 kb on - strand at 3263.728 kb on + strand at 3263.728 kb on + strand at 3263.733 kb on + strand at 3263.736 kb on - strand at 3263.797 kb on + strand, within HP15_3113 at 3263.804 kb on + strand, within HP15_3113 at 3263.904 kb on + strand, within HP15_3113 at 3264.089 kb on + strand, within HP15_3113 at 3264.099 kb on + strand, within HP15_3113 at 3264.171 kb on + strand, within HP15_3113 at 3264.171 kb on + strand, within HP15_3113 at 3264.171 kb on + strand, within HP15_3113 at 3264.179 kb on - strand, within HP15_3113 at 3264.202 kb on + strand, within HP15_3113 at 3264.219 kb on + strand, within HP15_3113 at 3264.222 kb on - strand, within HP15_3113 at 3264.229 kb on + strand, within HP15_3113 at 3264.237 kb on - strand, within HP15_3113 at 3264.327 kb on - strand, within HP15_3113 at 3264.331 kb on - strand, within HP15_3113 at 3264.366 kb on + strand, within HP15_3113 at 3264.413 kb on + strand, within HP15_3113 at 3264.413 kb on - strand, within HP15_3113 at 3264.462 kb on - strand at 3264.470 kb on + strand at 3264.484 kb on - strand at 3264.519 kb on + strand at 3264.519 kb on + strand at 3264.527 kb on - strand at 3264.529 kb on + strand at 3264.537 kb on - strand at 3264.581 kb on + strand at 3264.581 kb on + strand at 3264.586 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 3,261,753 + HP15_3111 0.14 +0.7 3,261,789 + HP15_3111 0.19 +0.6 3,262,142 + HP15_3111 0.69 +0.1 3,262,142 + HP15_3111 0.69 -2.3 3,262,189 + HP15_3111 0.76 +0.0 3,262,189 + HP15_3111 0.76 -0.7 3,262,382 + +1.0 3,262,389 + -0.2 3,262,390 - +0.5 3,262,580 - +1.1 3,262,610 + +0.4 3,262,624 - -0.2 3,262,807 + HP15_3112 0.15 -0.6 3,262,885 + HP15_3112 0.23 +0.1 3,262,917 + HP15_3112 0.26 +0.9 3,262,960 - HP15_3112 0.31 +1.3 3,263,045 + HP15_3112 0.40 +0.1 3,263,045 + HP15_3112 0.40 +0.1 3,263,060 + HP15_3112 0.41 +1.4 3,263,096 - HP15_3112 0.45 +0.8 3,263,098 + HP15_3112 0.45 +0.2 3,263,179 - HP15_3112 0.54 -0.5 3,263,224 + HP15_3112 0.58 +0.1 3,263,267 - HP15_3112 0.63 +0.6 3,263,271 + HP15_3112 0.63 -0.2 3,263,271 + HP15_3112 0.63 -0.1 3,263,286 - HP15_3112 0.65 -0.1 3,263,369 + HP15_3112 0.73 -0.2 3,263,412 + HP15_3112 0.78 +0.3 3,263,464 + HP15_3112 0.83 +0.1 3,263,501 + HP15_3112 0.87 +0.1 3,263,501 + HP15_3112 0.87 -0.1 3,263,509 - HP15_3112 0.88 +0.3 3,263,515 - HP15_3112 0.88 +0.1 3,263,523 - HP15_3112 0.89 +0.2 3,263,525 + HP15_3112 0.89 +0.3 3,263,567 - +0.7 3,263,567 - +0.2 3,263,596 - -0.1 3,263,624 + -0.8 3,263,664 - -0.2 3,263,728 + +0.5 3,263,728 + +1.0 3,263,733 + +0.3 3,263,736 - +0.4 3,263,797 + HP15_3113 0.11 -0.3 3,263,804 + HP15_3113 0.12 +0.2 3,263,904 + HP15_3113 0.25 +0.8 3,264,089 + HP15_3113 0.48 -0.6 3,264,099 + HP15_3113 0.49 -0.4 3,264,171 + HP15_3113 0.58 +0.0 3,264,171 + HP15_3113 0.58 +0.9 3,264,171 + HP15_3113 0.58 -0.1 3,264,179 - HP15_3113 0.59 +1.6 3,264,202 + HP15_3113 0.62 +0.5 3,264,219 + HP15_3113 0.64 +1.5 3,264,222 - HP15_3113 0.64 +0.7 3,264,229 + HP15_3113 0.65 +0.4 3,264,237 - HP15_3113 0.66 +0.3 3,264,327 - HP15_3113 0.77 -0.0 3,264,331 - HP15_3113 0.78 +1.1 3,264,366 + HP15_3113 0.82 -1.7 3,264,413 + HP15_3113 0.88 +0.3 3,264,413 - HP15_3113 0.88 +0.3 3,264,462 - -1.9 3,264,470 + -0.9 3,264,484 - -1.0 3,264,519 + +0.4 3,264,519 + +0.1 3,264,527 - +0.1 3,264,529 + +1.2 3,264,537 - +0.3 3,264,581 + +0.0 3,264,581 + -0.6 3,264,586 + +0.5
Or see this region's nucleotide sequence