Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2549 and HP15_2550 are separated by 23 nucleotides HP15_2550 and HP15_2551 are separated by 1 nucleotides HP15_2551 and HP15_2552 are separated by 3 nucleotides HP15_2552 and HP15_2553 overlap by 1 nucleotides
HP15_2549: HP15_2549 - adenine phosphoribosyltransferase, at 2,695,831 to 2,696,373
_2549
HP15_2550: HP15_2550 - fumarylacetoacetate hydrolase family protein, at 2,696,397 to 2,697,059
_2550
HP15_2551: HP15_2551 - ABC-1 domain protein, at 2,697,061 to 2,698,416
_2551
HP15_2552: HP15_2552 - silent information regulator protein Sir2, at 2,698,420 to 2,699,097
_2552
HP15_2553: HP15_2553 - oxidoreductase, FAD-binding protein, at 2,699,097 to 2,700,536
_2553
Position (kb)
2697
2698
2699 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2696.076 kb on - strand, within HP15_2549 at 2696.152 kb on - strand, within HP15_2549 at 2696.348 kb on - strand at 2696.348 kb on - strand at 2696.499 kb on - strand, within HP15_2550 at 2696.499 kb on - strand, within HP15_2550 at 2696.640 kb on + strand, within HP15_2550 at 2696.684 kb on + strand, within HP15_2550 at 2696.769 kb on - strand, within HP15_2550 at 2697.128 kb on + strand at 2697.129 kb on + strand at 2697.278 kb on + strand, within HP15_2551 at 2697.537 kb on - strand, within HP15_2551 at 2697.755 kb on - strand, within HP15_2551 at 2697.828 kb on + strand, within HP15_2551 at 2697.852 kb on + strand, within HP15_2551 at 2697.852 kb on + strand, within HP15_2551 at 2697.927 kb on + strand, within HP15_2551 at 2698.063 kb on + strand, within HP15_2551 at 2698.077 kb on - strand, within HP15_2551 at 2698.126 kb on - strand, within HP15_2551 at 2698.216 kb on + strand, within HP15_2551 at 2698.216 kb on + strand, within HP15_2551 at 2698.224 kb on - strand, within HP15_2551 at 2698.305 kb on + strand at 2698.362 kb on + strand at 2698.483 kb on - strand at 2698.509 kb on + strand, within HP15_2552 at 2698.517 kb on - strand, within HP15_2552 at 2698.532 kb on + strand, within HP15_2552 at 2698.628 kb on + strand, within HP15_2552 at 2698.636 kb on - strand, within HP15_2552 at 2698.934 kb on + strand, within HP15_2552 at 2698.942 kb on - strand, within HP15_2552 at 2699.010 kb on - strand, within HP15_2552 at 2699.010 kb on - strand, within HP15_2552 at 2699.035 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 2,696,076 - HP15_2549 0.45 -3.4 2,696,152 - HP15_2549 0.59 -0.5 2,696,348 - +0.5 2,696,348 - +0.7 2,696,499 - HP15_2550 0.15 -0.9 2,696,499 - HP15_2550 0.15 +0.2 2,696,640 + HP15_2550 0.37 +0.2 2,696,684 + HP15_2550 0.43 -1.3 2,696,769 - HP15_2550 0.56 +0.3 2,697,128 + +0.8 2,697,129 + +0.5 2,697,278 + HP15_2551 0.16 -2.9 2,697,537 - HP15_2551 0.35 -0.2 2,697,755 - HP15_2551 0.51 -2.3 2,697,828 + HP15_2551 0.57 -1.8 2,697,852 + HP15_2551 0.58 +1.7 2,697,852 + HP15_2551 0.58 +0.3 2,697,927 + HP15_2551 0.64 -0.2 2,698,063 + HP15_2551 0.74 -0.3 2,698,077 - HP15_2551 0.75 -1.3 2,698,126 - HP15_2551 0.79 -0.3 2,698,216 + HP15_2551 0.85 +0.2 2,698,216 + HP15_2551 0.85 +0.2 2,698,224 - HP15_2551 0.86 -0.7 2,698,305 + -1.2 2,698,362 + -2.1 2,698,483 - +0.9 2,698,509 + HP15_2552 0.13 +0.6 2,698,517 - HP15_2552 0.14 -0.5 2,698,532 + HP15_2552 0.17 +0.4 2,698,628 + HP15_2552 0.31 -0.3 2,698,636 - HP15_2552 0.32 -0.7 2,698,934 + HP15_2552 0.76 +0.9 2,698,942 - HP15_2552 0.77 -0.4 2,699,010 - HP15_2552 0.87 -0.4 2,699,010 - HP15_2552 0.87 +2.3 2,699,035 + +0.6
Or see this region's nucleotide sequence