Strain Fitness in Marinobacter adhaerens HP15 around HP15_2359

Experiment: m.b. Benzethonium chloride 0.025 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntHP15_2358 and HP15_2359 are separated by 123 nucleotidesHP15_2359 and HP15_2360 are separated by 227 nucleotides HP15_2358: HP15_2358 - chaperonin GroEL, at 2,483,931 to 2,485,538 _2358 HP15_2359: HP15_2359 - chaperonin Cpn10, at 2,485,662 to 2,485,916 _2359 HP15_2360: HP15_2360 - FxsA cytoplasmic membrane protein, at 2,486,144 to 2,486,692 _2360 Position (kb) 2485 2486Strain fitness (log2 ratio) -1 0 1at 2486.217 kb on - strand, within HP15_2360at 2486.330 kb on + strand, within HP15_2360at 2486.330 kb on + strand, within HP15_2360at 2486.338 kb on - strand, within HP15_2360at 2486.601 kb on + strand, within HP15_2360at 2486.705 kb on + strandat 2486.871 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM
remove
2,486,217 - HP15_2360 0.13 +0.3
2,486,330 + HP15_2360 0.34 -0.6
2,486,330 + HP15_2360 0.34 +1.0
2,486,338 - HP15_2360 0.35 +0.7
2,486,601 + HP15_2360 0.83 +0.5
2,486,705 + +0.2
2,486,871 - +0.3

Or see this region's nucleotide sequence