Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2255 and HP15_2256 overlap by 9 nucleotides HP15_2256 and HP15_2257 are separated by 109 nucleotides HP15_2257 and HP15_2258 are separated by 29 nucleotides HP15_2258 and HP15_2259 overlap by 26 nucleotides
HP15_2255: HP15_2255 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 2,374,736 to 2,376,205
_2255
HP15_2256: HP15_2256 - hypothetical protein, at 2,376,197 to 2,376,316
_2256
HP15_2257: HP15_2257 - transcription-repair-coupling factor, at 2,376,426 to 2,379,959
_2257
HP15_2258: HP15_2258 - 5'-methylthioadenosine phosphorylase, at 2,379,989 to 2,380,816
_2258
HP15_2259: HP15_2259 - methylthioadenosine phosphorylase, at 2,380,791 to 2,381,579
_2259
Position (kb)
2376
2377
2378
2379
2380 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2376.428 kb on + strand at 2376.469 kb on - strand at 2376.469 kb on - strand at 2376.581 kb on - strand at 2376.581 kb on - strand at 2376.581 kb on - strand at 2376.728 kb on - strand at 2376.763 kb on - strand at 2376.820 kb on + strand, within HP15_2257 at 2376.869 kb on + strand, within HP15_2257 at 2376.919 kb on + strand, within HP15_2257 at 2377.039 kb on + strand, within HP15_2257 at 2377.047 kb on - strand, within HP15_2257 at 2377.097 kb on + strand, within HP15_2257 at 2377.105 kb on - strand, within HP15_2257 at 2377.128 kb on - strand, within HP15_2257 at 2377.189 kb on + strand, within HP15_2257 at 2377.300 kb on + strand, within HP15_2257 at 2377.316 kb on - strand, within HP15_2257 at 2377.376 kb on + strand, within HP15_2257 at 2377.484 kb on + strand, within HP15_2257 at 2377.492 kb on - strand, within HP15_2257 at 2377.562 kb on - strand, within HP15_2257 at 2377.629 kb on - strand, within HP15_2257 at 2377.657 kb on - strand, within HP15_2257 at 2377.716 kb on - strand, within HP15_2257 at 2377.770 kb on - strand, within HP15_2257 at 2377.785 kb on - strand, within HP15_2257 at 2377.791 kb on + strand, within HP15_2257 at 2377.798 kb on + strand, within HP15_2257 at 2378.006 kb on - strand, within HP15_2257 at 2378.055 kb on - strand, within HP15_2257 at 2378.219 kb on - strand, within HP15_2257 at 2378.238 kb on + strand, within HP15_2257 at 2378.305 kb on + strand, within HP15_2257 at 2378.351 kb on - strand, within HP15_2257 at 2378.360 kb on + strand, within HP15_2257 at 2378.360 kb on + strand, within HP15_2257 at 2378.527 kb on + strand, within HP15_2257 at 2378.527 kb on + strand, within HP15_2257 at 2378.535 kb on - strand, within HP15_2257 at 2378.535 kb on - strand, within HP15_2257 at 2378.568 kb on + strand, within HP15_2257 at 2378.571 kb on - strand, within HP15_2257 at 2378.706 kb on - strand, within HP15_2257 at 2378.752 kb on + strand, within HP15_2257 at 2378.797 kb on - strand, within HP15_2257 at 2378.843 kb on - strand, within HP15_2257 at 2378.933 kb on + strand, within HP15_2257 at 2378.936 kb on - strand, within HP15_2257 at 2378.941 kb on - strand, within HP15_2257 at 2378.989 kb on - strand, within HP15_2257 at 2379.016 kb on + strand, within HP15_2257 at 2379.177 kb on - strand, within HP15_2257 at 2379.221 kb on + strand, within HP15_2257 at 2379.311 kb on + strand, within HP15_2257 at 2379.363 kb on + strand, within HP15_2257 at 2379.389 kb on - strand, within HP15_2257 at 2379.414 kb on - strand, within HP15_2257 at 2379.439 kb on - strand, within HP15_2257 at 2379.445 kb on - strand, within HP15_2257 at 2379.777 kb on + strand at 2379.800 kb on + strand at 2379.825 kb on + strand at 2379.833 kb on - strand at 2379.923 kb on + strand at 2380.798 kb on + strand at 2380.820 kb on + strand at 2380.828 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 2,376,428 + -4.0 2,376,469 - -1.6 2,376,469 - -2.1 2,376,581 - -1.9 2,376,581 - -2.2 2,376,581 - -0.3 2,376,728 - -2.5 2,376,763 - -1.5 2,376,820 + HP15_2257 0.11 -2.7 2,376,869 + HP15_2257 0.13 -5.1 2,376,919 + HP15_2257 0.14 -1.5 2,377,039 + HP15_2257 0.17 -1.9 2,377,047 - HP15_2257 0.18 -2.2 2,377,097 + HP15_2257 0.19 -0.9 2,377,105 - HP15_2257 0.19 -2.5 2,377,128 - HP15_2257 0.20 -0.5 2,377,189 + HP15_2257 0.22 -2.1 2,377,300 + HP15_2257 0.25 -1.8 2,377,316 - HP15_2257 0.25 -4.1 2,377,376 + HP15_2257 0.27 -1.8 2,377,484 + HP15_2257 0.30 -1.9 2,377,492 - HP15_2257 0.30 -2.1 2,377,562 - HP15_2257 0.32 -1.3 2,377,629 - HP15_2257 0.34 -2.5 2,377,657 - HP15_2257 0.35 -2.5 2,377,716 - HP15_2257 0.37 -2.2 2,377,770 - HP15_2257 0.38 -2.5 2,377,785 - HP15_2257 0.38 -1.3 2,377,791 + HP15_2257 0.39 -0.8 2,377,798 + HP15_2257 0.39 +1.7 2,378,006 - HP15_2257 0.45 -1.9 2,378,055 - HP15_2257 0.46 -1.8 2,378,219 - HP15_2257 0.51 -4.8 2,378,238 + HP15_2257 0.51 -2.0 2,378,305 + HP15_2257 0.53 -2.2 2,378,351 - HP15_2257 0.54 -2.4 2,378,360 + HP15_2257 0.55 -1.8 2,378,360 + HP15_2257 0.55 -2.8 2,378,527 + HP15_2257 0.59 -0.5 2,378,527 + HP15_2257 0.59 -2.6 2,378,535 - HP15_2257 0.60 -1.0 2,378,535 - HP15_2257 0.60 -1.8 2,378,568 + HP15_2257 0.61 -3.0 2,378,571 - HP15_2257 0.61 -2.6 2,378,706 - HP15_2257 0.65 -0.9 2,378,752 + HP15_2257 0.66 -1.1 2,378,797 - HP15_2257 0.67 -1.7 2,378,843 - HP15_2257 0.68 -1.3 2,378,933 + HP15_2257 0.71 -1.5 2,378,936 - HP15_2257 0.71 -2.5 2,378,941 - HP15_2257 0.71 -1.4 2,378,989 - HP15_2257 0.73 -1.6 2,379,016 + HP15_2257 0.73 -4.2 2,379,177 - HP15_2257 0.78 -1.6 2,379,221 + HP15_2257 0.79 -1.8 2,379,311 + HP15_2257 0.82 -1.9 2,379,363 + HP15_2257 0.83 -1.6 2,379,389 - HP15_2257 0.84 -3.3 2,379,414 - HP15_2257 0.85 -3.1 2,379,439 - HP15_2257 0.85 -1.4 2,379,445 - HP15_2257 0.85 -2.0 2,379,777 + -2.0 2,379,800 + -1.3 2,379,825 + -3.7 2,379,833 - -0.9 2,379,923 + +0.1 2,380,798 + +0.8 2,380,820 + -0.4 2,380,828 - +0.1
Or see this region's nucleotide sequence