Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2296 and Psest_2297 are separated by 362 nucleotides Psest_2297 and Psest_2298 are separated by 150 nucleotides Psest_2298 and Psest_2299 are separated by 51 nucleotides Psest_2299 and Psest_2300 are separated by 32 nucleotides Psest_2300 and Psest_2301 are separated by 273 nucleotides
Psest_2296: Psest_2296 - Transcriptional regulators, at 2,447,895 to 2,448,611
_2296
Psest_2297: Psest_2297 - hypothetical protein, at 2,448,974 to 2,450,401
_2297
Psest_2298: Psest_2298 - tRNA_Leu_TAG, at 2,450,552 to 2,450,636
_2298
Psest_2299: Psest_2299 - tRNA_His_GTG, at 2,450,688 to 2,450,763
_2299
Psest_2300: Psest_2300 - tRNA_Arg_TCT, at 2,450,796 to 2,450,872
_2300
Psest_2301: Psest_2301 - 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase, at 2,451,146 to 2,452,000
_2301
Position (kb)
2448
2449
2450
2451 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2448.022 kb on + strand, within Psest_2296 at 2448.023 kb on - strand, within Psest_2296 at 2448.043 kb on + strand, within Psest_2296 at 2448.043 kb on + strand, within Psest_2296 at 2448.043 kb on + strand, within Psest_2296 at 2448.043 kb on + strand, within Psest_2296 at 2448.044 kb on - strand, within Psest_2296 at 2448.044 kb on - strand, within Psest_2296 at 2448.044 kb on - strand, within Psest_2296 at 2448.044 kb on - strand, within Psest_2296 at 2448.044 kb on - strand, within Psest_2296 at 2448.044 kb on - strand, within Psest_2296 at 2448.044 kb on - strand, within Psest_2296 at 2448.047 kb on + strand, within Psest_2296 at 2448.047 kb on + strand, within Psest_2296 at 2448.048 kb on - strand, within Psest_2296 at 2448.048 kb on - strand, within Psest_2296 at 2448.048 kb on - strand, within Psest_2296 at 2448.048 kb on - strand, within Psest_2296 at 2448.048 kb on - strand, within Psest_2296 at 2448.048 kb on - strand, within Psest_2296 at 2448.048 kb on - strand, within Psest_2296 at 2448.118 kb on + strand, within Psest_2296 at 2448.118 kb on + strand, within Psest_2296 at 2448.118 kb on + strand, within Psest_2296 at 2448.118 kb on + strand, within Psest_2296 at 2448.118 kb on + strand, within Psest_2296 at 2448.118 kb on + strand, within Psest_2296 at 2448.119 kb on - strand, within Psest_2296 at 2448.119 kb on - strand, within Psest_2296 at 2448.119 kb on - strand, within Psest_2296 at 2448.119 kb on - strand, within Psest_2296 at 2448.119 kb on - strand, within Psest_2296 at 2448.187 kb on - strand, within Psest_2296 at 2448.187 kb on - strand, within Psest_2296 at 2448.246 kb on + strand, within Psest_2296 at 2448.247 kb on - strand, within Psest_2296 at 2448.247 kb on - strand, within Psest_2296 at 2448.598 kb on + strand at 2448.598 kb on + strand at 2448.598 kb on + strand at 2448.598 kb on + strand at 2448.598 kb on + strand at 2448.599 kb on - strand at 2448.612 kb on + strand at 2448.612 kb on + strand at 2448.612 kb on + strand at 2448.612 kb on + strand at 2448.612 kb on + strand at 2448.612 kb on + strand at 2448.613 kb on - strand at 2448.664 kb on + strand at 2448.665 kb on - strand at 2448.671 kb on + strand at 2448.671 kb on + strand at 2448.671 kb on + strand at 2448.671 kb on + strand at 2448.671 kb on + strand at 2448.671 kb on + strand at 2448.671 kb on + strand at 2448.671 kb on + strand at 2448.672 kb on - strand at 2448.672 kb on - strand at 2448.672 kb on - strand at 2448.672 kb on - strand at 2448.672 kb on - strand at 2448.672 kb on - strand at 2448.672 kb on - strand at 2448.702 kb on + strand at 2448.705 kb on + strand at 2448.706 kb on - strand at 2448.711 kb on + strand at 2448.711 kb on + strand at 2448.712 kb on - strand at 2448.712 kb on - strand at 2448.715 kb on + strand at 2448.715 kb on + strand at 2448.715 kb on + strand at 2448.716 kb on - strand at 2448.716 kb on - strand at 2448.843 kb on + strand at 2448.843 kb on + strand at 2448.844 kb on - strand at 2448.844 kb on - strand at 2448.844 kb on - strand at 2448.844 kb on - strand at 2448.844 kb on - strand at 2448.858 kb on + strand at 2448.858 kb on + strand at 2448.859 kb on - strand at 2448.859 kb on - strand at 2448.869 kb on - strand at 2448.869 kb on - strand at 2448.869 kb on - strand at 2448.914 kb on - strand at 2448.919 kb on + strand at 2448.919 kb on + strand at 2448.920 kb on - strand at 2448.920 kb on - strand at 2448.955 kb on + strand at 2448.955 kb on + strand at 2448.956 kb on - strand at 2449.022 kb on - strand at 2449.058 kb on + strand at 2449.058 kb on + strand at 2449.058 kb on + strand at 2449.059 kb on - strand at 2449.059 kb on - strand at 2449.059 kb on - strand at 2449.124 kb on - strand, within Psest_2297 at 2449.229 kb on + strand, within Psest_2297 at 2449.229 kb on + strand, within Psest_2297 at 2449.229 kb on + strand, within Psest_2297 at 2449.229 kb on + strand, within Psest_2297 at 2449.229 kb on + strand, within Psest_2297 at 2449.230 kb on - strand, within Psest_2297 at 2449.230 kb on - strand, within Psest_2297 at 2449.230 kb on - strand, within Psest_2297 at 2449.230 kb on - strand, within Psest_2297 at 2449.230 kb on - strand, within Psest_2297 at 2449.230 kb on - strand, within Psest_2297 at 2449.230 kb on - strand, within Psest_2297 at 2449.230 kb on - strand, within Psest_2297 at 2449.230 kb on - strand, within Psest_2297 at 2449.230 kb on - strand, within Psest_2297 at 2449.395 kb on - strand, within Psest_2297 at 2449.395 kb on - strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.415 kb on + strand, within Psest_2297 at 2449.416 kb on - strand, within Psest_2297 at 2449.416 kb on - strand, within Psest_2297 at 2449.416 kb on - strand, within Psest_2297 at 2449.416 kb on - strand, within Psest_2297 at 2449.416 kb on - strand, within Psest_2297 at 2449.416 kb on - strand, within Psest_2297 at 2449.416 kb on - strand, within Psest_2297 at 2449.416 kb on - strand, within Psest_2297 at 2449.416 kb on - strand, within Psest_2297 at 2449.416 kb on - strand, within Psest_2297 at 2449.470 kb on - strand, within Psest_2297 at 2449.550 kb on + strand, within Psest_2297 at 2449.551 kb on - strand, within Psest_2297 at 2449.604 kb on + strand, within Psest_2297 at 2449.605 kb on - strand, within Psest_2297 at 2449.605 kb on - strand, within Psest_2297 at 2449.721 kb on + strand, within Psest_2297 at 2449.721 kb on + strand, within Psest_2297 at 2449.721 kb on + strand, within Psest_2297 at 2449.722 kb on - strand, within Psest_2297 at 2449.722 kb on - strand, within Psest_2297 at 2449.722 kb on - strand, within Psest_2297 at 2449.722 kb on - strand, within Psest_2297 at 2449.794 kb on - strand, within Psest_2297 at 2449.794 kb on - strand, within Psest_2297 at 2450.018 kb on + strand, within Psest_2297 at 2450.018 kb on + strand, within Psest_2297 at 2450.184 kb on + strand, within Psest_2297 at 2450.185 kb on - strand, within Psest_2297 at 2450.452 kb on + strand at 2450.453 kb on - strand at 2450.456 kb on + strand at 2450.456 kb on + strand at 2450.457 kb on - strand at 2450.457 kb on - strand at 2450.529 kb on + strand at 2450.530 kb on - strand at 2450.530 kb on - strand at 2450.876 kb on - strand at 2451.037 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 2,448,022 + Psest_2296 0.18 +0.5 2,448,023 - Psest_2296 0.18 +0.4 2,448,043 + Psest_2296 0.21 +0.1 2,448,043 + Psest_2296 0.21 +1.0 2,448,043 + Psest_2296 0.21 -1.7 2,448,043 + Psest_2296 0.21 -0.1 2,448,044 - Psest_2296 0.21 +0.9 2,448,044 - Psest_2296 0.21 +0.7 2,448,044 - Psest_2296 0.21 +0.3 2,448,044 - Psest_2296 0.21 +0.9 2,448,044 - Psest_2296 0.21 +1.6 2,448,044 - Psest_2296 0.21 +0.1 2,448,044 - Psest_2296 0.21 +1.5 2,448,047 + Psest_2296 0.21 -1.4 2,448,047 + Psest_2296 0.21 +1.2 2,448,048 - Psest_2296 0.21 +0.2 2,448,048 - Psest_2296 0.21 -0.1 2,448,048 - Psest_2296 0.21 +0.7 2,448,048 - Psest_2296 0.21 +0.3 2,448,048 - Psest_2296 0.21 -0.5 2,448,048 - Psest_2296 0.21 +0.5 2,448,048 - Psest_2296 0.21 -0.4 2,448,118 + Psest_2296 0.31 -0.1 2,448,118 + Psest_2296 0.31 +2.8 2,448,118 + Psest_2296 0.31 +0.2 2,448,118 + Psest_2296 0.31 +0.9 2,448,118 + Psest_2296 0.31 +1.4 2,448,118 + Psest_2296 0.31 +1.7 2,448,119 - Psest_2296 0.31 +0.1 2,448,119 - Psest_2296 0.31 +0.4 2,448,119 - Psest_2296 0.31 +1.6 2,448,119 - Psest_2296 0.31 +0.2 2,448,119 - Psest_2296 0.31 +0.9 2,448,187 - Psest_2296 0.41 +0.9 2,448,187 - Psest_2296 0.41 +0.2 2,448,246 + Psest_2296 0.49 +2.0 2,448,247 - Psest_2296 0.49 -0.1 2,448,247 - Psest_2296 0.49 +0.2 2,448,598 + -0.0 2,448,598 + +0.8 2,448,598 + +1.2 2,448,598 + +1.4 2,448,598 + +1.3 2,448,599 - -0.1 2,448,612 + +1.3 2,448,612 + +1.3 2,448,612 + +1.5 2,448,612 + +1.6 2,448,612 + +1.1 2,448,612 + +0.9 2,448,613 - -1.1 2,448,664 + +2.0 2,448,665 - -0.1 2,448,671 + +1.3 2,448,671 + +1.3 2,448,671 + +1.7 2,448,671 + +2.5 2,448,671 + -1.1 2,448,671 + +1.6 2,448,671 + +1.9 2,448,671 + +0.2 2,448,672 - +0.7 2,448,672 - -0.9 2,448,672 - +0.7 2,448,672 - -0.3 2,448,672 - +0.3 2,448,672 - +0.6 2,448,672 - +0.9 2,448,702 + +1.1 2,448,705 + +1.3 2,448,706 - -0.7 2,448,711 + +1.8 2,448,711 + +1.3 2,448,712 - -0.3 2,448,712 - +0.3 2,448,715 + +0.4 2,448,715 + +0.5 2,448,715 + +1.3 2,448,716 - +0.7 2,448,716 - +0.7 2,448,843 + +0.8 2,448,843 + +1.7 2,448,844 - +1.0 2,448,844 - +0.4 2,448,844 - +0.4 2,448,844 - +0.3 2,448,844 - +0.7 2,448,858 + -0.2 2,448,858 + +1.3 2,448,859 - +0.0 2,448,859 - -0.1 2,448,869 - +1.2 2,448,869 - -1.4 2,448,869 - +0.8 2,448,914 - +0.9 2,448,919 + +2.0 2,448,919 + +0.7 2,448,920 - +0.5 2,448,920 - +1.1 2,448,955 + +1.5 2,448,955 + +1.8 2,448,956 - +1.2 2,449,022 - -0.6 2,449,058 + -0.3 2,449,058 + -0.2 2,449,058 + -1.4 2,449,059 - +0.6 2,449,059 - -0.0 2,449,059 - -0.4 2,449,124 - Psest_2297 0.11 -0.3 2,449,229 + Psest_2297 0.18 -1.3 2,449,229 + Psest_2297 0.18 -1.1 2,449,229 + Psest_2297 0.18 -2.1 2,449,229 + Psest_2297 0.18 -1.1 2,449,229 + Psest_2297 0.18 +0.4 2,449,230 - Psest_2297 0.18 +0.2 2,449,230 - Psest_2297 0.18 -0.3 2,449,230 - Psest_2297 0.18 +0.1 2,449,230 - Psest_2297 0.18 -1.2 2,449,230 - Psest_2297 0.18 -1.1 2,449,230 - Psest_2297 0.18 -0.4 2,449,230 - Psest_2297 0.18 -1.2 2,449,230 - Psest_2297 0.18 -0.8 2,449,230 - Psest_2297 0.18 -0.1 2,449,230 - Psest_2297 0.18 +1.3 2,449,395 - Psest_2297 0.29 -0.8 2,449,395 - Psest_2297 0.29 +0.7 2,449,415 + Psest_2297 0.31 -0.9 2,449,415 + Psest_2297 0.31 -0.3 2,449,415 + Psest_2297 0.31 -1.0 2,449,415 + Psest_2297 0.31 +0.1 2,449,415 + Psest_2297 0.31 -0.2 2,449,415 + Psest_2297 0.31 -0.5 2,449,415 + Psest_2297 0.31 -1.0 2,449,415 + Psest_2297 0.31 -0.6 2,449,415 + Psest_2297 0.31 -2.3 2,449,415 + Psest_2297 0.31 +0.7 2,449,415 + Psest_2297 0.31 -0.5 2,449,415 + Psest_2297 0.31 -0.3 2,449,415 + Psest_2297 0.31 -0.3 2,449,415 + Psest_2297 0.31 -0.0 2,449,416 - Psest_2297 0.31 -1.1 2,449,416 - Psest_2297 0.31 -1.1 2,449,416 - Psest_2297 0.31 -1.1 2,449,416 - Psest_2297 0.31 -0.3 2,449,416 - Psest_2297 0.31 -0.5 2,449,416 - Psest_2297 0.31 -0.7 2,449,416 - Psest_2297 0.31 -0.6 2,449,416 - Psest_2297 0.31 -0.7 2,449,416 - Psest_2297 0.31 -0.7 2,449,416 - Psest_2297 0.31 -0.2 2,449,470 - Psest_2297 0.35 -0.6 2,449,550 + Psest_2297 0.40 -0.7 2,449,551 - Psest_2297 0.40 -1.4 2,449,604 + Psest_2297 0.44 -0.3 2,449,605 - Psest_2297 0.44 -0.5 2,449,605 - Psest_2297 0.44 -0.2 2,449,721 + Psest_2297 0.52 -0.3 2,449,721 + Psest_2297 0.52 +0.2 2,449,721 + Psest_2297 0.52 -0.8 2,449,722 - Psest_2297 0.52 -0.7 2,449,722 - Psest_2297 0.52 -0.7 2,449,722 - Psest_2297 0.52 -3.1 2,449,722 - Psest_2297 0.52 -1.4 2,449,794 - Psest_2297 0.57 -2.4 2,449,794 - Psest_2297 0.57 +0.6 2,450,018 + Psest_2297 0.73 -1.1 2,450,018 + Psest_2297 0.73 +0.3 2,450,184 + Psest_2297 0.85 -1.7 2,450,185 - Psest_2297 0.85 -0.6 2,450,452 + +1.5 2,450,453 - +1.1 2,450,456 + +1.0 2,450,456 + +0.8 2,450,457 - -0.0 2,450,457 - +0.4 2,450,529 + +0.4 2,450,530 - +0.1 2,450,530 - -0.2 2,450,876 - -0.6 2,451,037 + +1.0
Or see this region's nucleotide sequence