Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1399 and Psest_1400 are separated by 50 nucleotides Psest_1400 and Psest_1401 overlap by 8 nucleotides Psest_1401 and Psest_1402 are separated by 302 nucleotides
Psest_1399: Psest_1399 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components, at 1,506,771 to 1,507,748
_1399
Psest_1400: Psest_1400 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 1,507,799 to 1,508,548
_1400
Psest_1401: Psest_1401 - Isopenicillin N synthase and related dioxygenases, at 1,508,541 to 1,509,521
_1401
Psest_1402: Psest_1402 - Putative threonine efflux protein, at 1,509,824 to 1,510,432
_1402
Position (kb)
1508
1509
1510 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1507.623 kb on + strand, within Psest_1399 at 1507.623 kb on + strand, within Psest_1399 at 1507.623 kb on + strand, within Psest_1399 at 1507.623 kb on + strand, within Psest_1399 at 1507.623 kb on + strand, within Psest_1399 at 1507.624 kb on - strand, within Psest_1399 at 1507.624 kb on - strand, within Psest_1399 at 1507.624 kb on - strand, within Psest_1399 at 1507.624 kb on - strand, within Psest_1399 at 1507.624 kb on - strand, within Psest_1399 at 1507.624 kb on - strand, within Psest_1399 at 1507.627 kb on + strand, within Psest_1399 at 1507.627 kb on + strand, within Psest_1399 at 1507.627 kb on + strand, within Psest_1399 at 1507.627 kb on + strand, within Psest_1399 at 1507.627 kb on + strand, within Psest_1399 at 1507.627 kb on + strand, within Psest_1399 at 1507.627 kb on + strand, within Psest_1399 at 1507.628 kb on - strand, within Psest_1399 at 1507.628 kb on - strand, within Psest_1399 at 1507.628 kb on - strand, within Psest_1399 at 1507.628 kb on - strand, within Psest_1399 at 1507.628 kb on - strand, within Psest_1399 at 1507.628 kb on - strand, within Psest_1399 at 1507.791 kb on + strand at 1507.980 kb on + strand, within Psest_1400 at 1507.980 kb on + strand, within Psest_1400 at 1507.980 kb on + strand, within Psest_1400 at 1507.981 kb on - strand, within Psest_1400 at 1507.981 kb on - strand, within Psest_1400 at 1507.981 kb on - strand, within Psest_1400 at 1508.259 kb on + strand, within Psest_1400 at 1508.259 kb on + strand, within Psest_1400 at 1508.259 kb on + strand, within Psest_1400 at 1508.286 kb on + strand, within Psest_1400 at 1508.286 kb on + strand, within Psest_1400 at 1508.287 kb on - strand, within Psest_1400 at 1508.287 kb on - strand, within Psest_1400 at 1508.287 kb on - strand, within Psest_1400 at 1508.287 kb on - strand, within Psest_1400 at 1508.287 kb on - strand, within Psest_1400 at 1508.388 kb on + strand, within Psest_1400 at 1508.388 kb on + strand, within Psest_1400 at 1508.389 kb on - strand, within Psest_1400 at 1508.548 kb on + strand at 1508.548 kb on + strand at 1508.548 kb on + strand at 1508.548 kb on + strand at 1508.548 kb on + strand at 1508.549 kb on - strand at 1508.549 kb on - strand at 1508.549 kb on - strand at 1508.684 kb on + strand, within Psest_1401 at 1508.685 kb on - strand, within Psest_1401 at 1508.685 kb on - strand, within Psest_1401 at 1508.685 kb on - strand, within Psest_1401 at 1508.721 kb on + strand, within Psest_1401 at 1508.722 kb on - strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.782 kb on + strand, within Psest_1401 at 1508.783 kb on - strand, within Psest_1401 at 1508.783 kb on - strand, within Psest_1401 at 1508.783 kb on - strand, within Psest_1401 at 1508.783 kb on - strand, within Psest_1401 at 1508.783 kb on - strand, within Psest_1401 at 1508.783 kb on - strand, within Psest_1401 at 1508.783 kb on - strand, within Psest_1401 at 1508.783 kb on - strand, within Psest_1401 at 1508.783 kb on - strand, within Psest_1401 at 1508.783 kb on - strand, within Psest_1401 at 1508.783 kb on - strand, within Psest_1401 at 1508.783 kb on - strand, within Psest_1401 at 1508.783 kb on - strand, within Psest_1401 at 1509.184 kb on + strand, within Psest_1401 at 1509.184 kb on + strand, within Psest_1401 at 1509.184 kb on + strand, within Psest_1401 at 1509.184 kb on + strand, within Psest_1401 at 1509.185 kb on - strand, within Psest_1401 at 1509.185 kb on - strand, within Psest_1401 at 1509.185 kb on - strand, within Psest_1401 at 1509.185 kb on - strand, within Psest_1401 at 1509.185 kb on - strand, within Psest_1401 at 1509.185 kb on - strand, within Psest_1401 at 1509.185 kb on - strand, within Psest_1401 at 1509.185 kb on - strand, within Psest_1401 at 1509.185 kb on - strand, within Psest_1401 at 1509.185 kb on - strand, within Psest_1401 at 1509.247 kb on + strand, within Psest_1401 at 1509.569 kb on + strand at 1509.569 kb on + strand at 1509.569 kb on + strand at 1509.642 kb on - strand at 1509.642 kb on - strand at 1509.734 kb on + strand at 1509.735 kb on - strand at 1509.735 kb on - strand at 1510.004 kb on + strand, within Psest_1402 at 1510.004 kb on + strand, within Psest_1402 at 1510.004 kb on + strand, within Psest_1402 at 1510.004 kb on + strand, within Psest_1402 at 1510.005 kb on - strand, within Psest_1402 at 1510.005 kb on - strand, within Psest_1402 at 1510.005 kb on - strand, within Psest_1402 at 1510.005 kb on - strand, within Psest_1402 at 1510.035 kb on + strand, within Psest_1402 at 1510.035 kb on + strand, within Psest_1402 at 1510.035 kb on + strand, within Psest_1402 at 1510.035 kb on + strand, within Psest_1402 at 1510.035 kb on + strand, within Psest_1402 at 1510.036 kb on - strand, within Psest_1402 at 1510.036 kb on - strand, within Psest_1402 at 1510.036 kb on - strand, within Psest_1402 at 1510.036 kb on - strand, within Psest_1402 at 1510.036 kb on - strand, within Psest_1402 at 1510.036 kb on - strand, within Psest_1402 at 1510.036 kb on - strand, within Psest_1402 at 1510.103 kb on + strand, within Psest_1402 at 1510.103 kb on + strand, within Psest_1402 at 1510.103 kb on + strand, within Psest_1402 at 1510.103 kb on + strand, within Psest_1402 at 1510.103 kb on + strand, within Psest_1402 at 1510.104 kb on - strand, within Psest_1402 at 1510.104 kb on - strand, within Psest_1402 at 1510.104 kb on - strand, within Psest_1402 at 1510.104 kb on - strand, within Psest_1402 at 1510.130 kb on + strand, within Psest_1402 at 1510.131 kb on - strand, within Psest_1402 at 1510.131 kb on - strand, within Psest_1402 at 1510.131 kb on - strand, within Psest_1402 at 1510.183 kb on + strand, within Psest_1402 at 1510.184 kb on - strand, within Psest_1402 at 1510.184 kb on - strand, within Psest_1402 at 1510.184 kb on - strand, within Psest_1402 at 1510.185 kb on + strand, within Psest_1402 at 1510.185 kb on + strand, within Psest_1402 at 1510.185 kb on + strand, within Psest_1402 at 1510.186 kb on - strand, within Psest_1402 at 1510.436 kb on + strand at 1510.436 kb on + strand at 1510.436 kb on + strand at 1510.436 kb on + strand at 1510.436 kb on + strand at 1510.437 kb on - strand at 1510.437 kb on - strand at 1510.437 kb on - strand at 1510.437 kb on - strand at 1510.437 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 1,507,623 + Psest_1399 0.87 +1.1 1,507,623 + Psest_1399 0.87 -1.4 1,507,623 + Psest_1399 0.87 -0.0 1,507,623 + Psest_1399 0.87 +0.3 1,507,623 + Psest_1399 0.87 +1.0 1,507,624 - Psest_1399 0.87 +1.5 1,507,624 - Psest_1399 0.87 +0.5 1,507,624 - Psest_1399 0.87 -1.3 1,507,624 - Psest_1399 0.87 +0.1 1,507,624 - Psest_1399 0.87 -0.9 1,507,624 - Psest_1399 0.87 +0.4 1,507,627 + Psest_1399 0.88 -0.2 1,507,627 + Psest_1399 0.88 +0.7 1,507,627 + Psest_1399 0.88 -0.6 1,507,627 + Psest_1399 0.88 -0.0 1,507,627 + Psest_1399 0.88 +0.2 1,507,627 + Psest_1399 0.88 +1.1 1,507,627 + Psest_1399 0.88 -0.3 1,507,628 - Psest_1399 0.88 +0.3 1,507,628 - Psest_1399 0.88 -1.8 1,507,628 - Psest_1399 0.88 -1.0 1,507,628 - Psest_1399 0.88 +0.6 1,507,628 - Psest_1399 0.88 -1.4 1,507,628 - Psest_1399 0.88 -0.6 1,507,791 + -0.2 1,507,980 + Psest_1400 0.24 +0.5 1,507,980 + Psest_1400 0.24 +0.5 1,507,980 + Psest_1400 0.24 +0.4 1,507,981 - Psest_1400 0.24 -2.2 1,507,981 - Psest_1400 0.24 +0.3 1,507,981 - Psest_1400 0.24 -1.3 1,508,259 + Psest_1400 0.61 +0.5 1,508,259 + Psest_1400 0.61 -0.2 1,508,259 + Psest_1400 0.61 +0.2 1,508,286 + Psest_1400 0.65 -1.7 1,508,286 + Psest_1400 0.65 -0.2 1,508,287 - Psest_1400 0.65 -0.6 1,508,287 - Psest_1400 0.65 -0.3 1,508,287 - Psest_1400 0.65 -0.9 1,508,287 - Psest_1400 0.65 +0.5 1,508,287 - Psest_1400 0.65 -0.1 1,508,388 + Psest_1400 0.79 +0.2 1,508,388 + Psest_1400 0.79 +0.9 1,508,389 - Psest_1400 0.79 -0.2 1,508,548 + +0.2 1,508,548 + +1.0 1,508,548 + -0.2 1,508,548 + -1.1 1,508,548 + +0.8 1,508,549 - -0.9 1,508,549 - -1.2 1,508,549 - +0.5 1,508,684 + Psest_1401 0.15 +1.0 1,508,685 - Psest_1401 0.15 +0.6 1,508,685 - Psest_1401 0.15 -0.0 1,508,685 - Psest_1401 0.15 +0.7 1,508,721 + Psest_1401 0.18 -0.6 1,508,722 - Psest_1401 0.18 -0.2 1,508,782 + Psest_1401 0.25 +1.3 1,508,782 + Psest_1401 0.25 +0.5 1,508,782 + Psest_1401 0.25 -0.2 1,508,782 + Psest_1401 0.25 +1.4 1,508,782 + Psest_1401 0.25 +0.5 1,508,782 + Psest_1401 0.25 -0.6 1,508,782 + Psest_1401 0.25 +0.0 1,508,782 + Psest_1401 0.25 +1.8 1,508,782 + Psest_1401 0.25 +0.2 1,508,782 + Psest_1401 0.25 +0.5 1,508,782 + Psest_1401 0.25 +3.0 1,508,782 + Psest_1401 0.25 -0.3 1,508,782 + Psest_1401 0.25 +1.2 1,508,782 + Psest_1401 0.25 +0.4 1,508,782 + Psest_1401 0.25 +0.4 1,508,782 + Psest_1401 0.25 +0.3 1,508,782 + Psest_1401 0.25 +0.1 1,508,782 + Psest_1401 0.25 +1.3 1,508,783 - Psest_1401 0.25 +0.7 1,508,783 - Psest_1401 0.25 +1.6 1,508,783 - Psest_1401 0.25 +0.6 1,508,783 - Psest_1401 0.25 +0.3 1,508,783 - Psest_1401 0.25 +3.0 1,508,783 - Psest_1401 0.25 +0.0 1,508,783 - Psest_1401 0.25 +0.3 1,508,783 - Psest_1401 0.25 +0.5 1,508,783 - Psest_1401 0.25 -0.2 1,508,783 - Psest_1401 0.25 +0.2 1,508,783 - Psest_1401 0.25 +0.1 1,508,783 - Psest_1401 0.25 +0.8 1,508,783 - Psest_1401 0.25 -0.6 1,509,184 + Psest_1401 0.66 +0.7 1,509,184 + Psest_1401 0.66 +0.2 1,509,184 + Psest_1401 0.66 +0.3 1,509,184 + Psest_1401 0.66 +0.3 1,509,185 - Psest_1401 0.66 +0.3 1,509,185 - Psest_1401 0.66 +0.0 1,509,185 - Psest_1401 0.66 -0.3 1,509,185 - Psest_1401 0.66 -0.2 1,509,185 - Psest_1401 0.66 +0.2 1,509,185 - Psest_1401 0.66 -0.6 1,509,185 - Psest_1401 0.66 +0.2 1,509,185 - Psest_1401 0.66 +0.3 1,509,185 - Psest_1401 0.66 +0.4 1,509,185 - Psest_1401 0.66 -0.2 1,509,247 + Psest_1401 0.72 +0.3 1,509,569 + +0.2 1,509,569 + +3.3 1,509,569 + -1.3 1,509,642 - +0.2 1,509,642 - +1.0 1,509,734 + -1.2 1,509,735 - +0.7 1,509,735 - +0.1 1,510,004 + Psest_1402 0.30 -0.5 1,510,004 + Psest_1402 0.30 -0.1 1,510,004 + Psest_1402 0.30 -1.3 1,510,004 + Psest_1402 0.30 +0.1 1,510,005 - Psest_1402 0.30 +0.4 1,510,005 - Psest_1402 0.30 -0.8 1,510,005 - Psest_1402 0.30 -0.0 1,510,005 - Psest_1402 0.30 +0.6 1,510,035 + Psest_1402 0.35 +0.5 1,510,035 + Psest_1402 0.35 +1.4 1,510,035 + Psest_1402 0.35 -0.3 1,510,035 + Psest_1402 0.35 +0.4 1,510,035 + Psest_1402 0.35 -2.2 1,510,036 - Psest_1402 0.35 +0.2 1,510,036 - Psest_1402 0.35 +1.0 1,510,036 - Psest_1402 0.35 +0.1 1,510,036 - Psest_1402 0.35 +0.3 1,510,036 - Psest_1402 0.35 -0.5 1,510,036 - Psest_1402 0.35 +1.0 1,510,036 - Psest_1402 0.35 -1.0 1,510,103 + Psest_1402 0.46 +0.6 1,510,103 + Psest_1402 0.46 +0.9 1,510,103 + Psest_1402 0.46 -0.6 1,510,103 + Psest_1402 0.46 -0.2 1,510,103 + Psest_1402 0.46 +0.6 1,510,104 - Psest_1402 0.46 +0.6 1,510,104 - Psest_1402 0.46 +0.1 1,510,104 - Psest_1402 0.46 +0.7 1,510,104 - Psest_1402 0.46 +0.1 1,510,130 + Psest_1402 0.50 -0.7 1,510,131 - Psest_1402 0.50 -0.3 1,510,131 - Psest_1402 0.50 +0.9 1,510,131 - Psest_1402 0.50 -0.9 1,510,183 + Psest_1402 0.59 +0.2 1,510,184 - Psest_1402 0.59 +0.2 1,510,184 - Psest_1402 0.59 -0.0 1,510,184 - Psest_1402 0.59 -0.3 1,510,185 + Psest_1402 0.59 -0.4 1,510,185 + Psest_1402 0.59 -0.9 1,510,185 + Psest_1402 0.59 -0.1 1,510,186 - Psest_1402 0.59 -0.0 1,510,436 + +0.1 1,510,436 + -0.6 1,510,436 + +0.3 1,510,436 + -0.3 1,510,436 + +0.1 1,510,437 - +0.5 1,510,437 - -1.3 1,510,437 - -0.0 1,510,437 - +0.3 1,510,437 - +0.1
Or see this region's nucleotide sequence