Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1310 and HP15_1311 are separated by 45 nucleotides HP15_1311 and HP15_1312 are separated by 13 nucleotides HP15_1312 and HP15_1313 are separated by 5 nucleotides
HP15_1310: HP15_1310 - methyl-accepting chemotaxis sensory transducer, at 1,369,393 to 1,371,423
_1310
HP15_1311: HP15_1311 - ATP-cobalamin adenosyltransferase, at 1,371,469 to 1,372,026
_1311
HP15_1312: HP15_1312 - 2-dehydropantoate 2-reductase, at 1,372,040 to 1,372,933
_1312
HP15_1313: HP15_1313 - valyl-tRNA synthetase, at 1,372,939 to 1,375,791
_1313
Position (kb) 1372
1373 Strain fitness (log2 ratio) -1
0
1
2
3 at 1371.051 kb on - strand, within HP15_1310 at 1371.051 kb on - strand, within HP15_1310 at 1371.105 kb on - strand, within HP15_1310 at 1371.140 kb on + strand, within HP15_1310 at 1371.155 kb on + strand, within HP15_1310 at 1371.417 kb on + strand at 1371.560 kb on - strand, within HP15_1311 at 1371.574 kb on + strand, within HP15_1311 at 1371.656 kb on + strand, within HP15_1311 at 1371.972 kb on - strand at 1372.031 kb on - strand at 1372.327 kb on - strand, within HP15_1312 at 1372.355 kb on + strand, within HP15_1312 at 1372.602 kb on - strand, within HP15_1312 at 1372.645 kb on - strand, within HP15_1312 at 1372.670 kb on + strand, within HP15_1312 at 1372.714 kb on - strand, within HP15_1312 at 1372.728 kb on + strand, within HP15_1312 at 1372.861 kb on + strand at 1372.872 kb on + strand at 1372.890 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 1,371,051 - HP15_1310 0.82 -0.4 1,371,051 - HP15_1310 0.82 -0.0 1,371,105 - HP15_1310 0.84 -0.0 1,371,140 + HP15_1310 0.86 +0.1 1,371,155 + HP15_1310 0.87 -0.3 1,371,417 + -0.2 1,371,560 - HP15_1311 0.16 -0.9 1,371,574 + HP15_1311 0.19 -0.2 1,371,656 + HP15_1311 0.34 -0.4 1,371,972 - -1.0 1,372,031 - -1.7 1,372,327 - HP15_1312 0.32 -0.4 1,372,355 + HP15_1312 0.35 +0.2 1,372,602 - HP15_1312 0.63 +0.0 1,372,645 - HP15_1312 0.68 +1.6 1,372,670 + HP15_1312 0.70 +0.7 1,372,714 - HP15_1312 0.75 +2.9 1,372,728 + HP15_1312 0.77 +0.7 1,372,861 + +0.3 1,372,872 + +0.0 1,372,890 + -0.3
Or see this region's nucleotide sequence