Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1284 and Psest_1285 are separated by 128 nucleotides Psest_1285 and Psest_1286 are separated by 126 nucleotides Psest_1286 and Psest_1287 are separated by 143 nucleotides
Psest_1284: Psest_1284 - exodeoxyribonuclease VII, large subunit, at 1,388,247 to 1,389,623
_1284
Psest_1285: Psest_1285 - hypothetical protein, at 1,389,752 to 1,390,303
_1285
Psest_1286: Psest_1286 - inosine-5'-monophosphate dehydrogenase, at 1,390,430 to 1,391,899
_1286
Psest_1287: Psest_1287 - GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit, at 1,392,043 to 1,393,623
_1287
Position (kb)
1390
1391
1392 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1389.463 kb on + strand, within Psest_1284 at 1389.463 kb on + strand, within Psest_1284 at 1389.463 kb on + strand, within Psest_1284 at 1389.463 kb on + strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.636 kb on - strand at 1389.636 kb on - strand at 1389.752 kb on - strand at 1389.760 kb on + strand at 1389.760 kb on + strand at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.006 kb on + strand, within Psest_1285 at 1390.007 kb on - strand, within Psest_1285 at 1390.335 kb on + strand at 1390.336 kb on - strand at 1390.351 kb on - strand at 1390.351 kb on - strand at 1391.980 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 1,389,463 + Psest_1284 0.88 -1.3 1,389,463 + Psest_1284 0.88 +0.3 1,389,463 + Psest_1284 0.88 -0.4 1,389,463 + Psest_1284 0.88 -0.7 1,389,464 - Psest_1284 0.88 +0.4 1,389,464 - Psest_1284 0.88 +0.4 1,389,464 - Psest_1284 0.88 -1.3 1,389,464 - Psest_1284 0.88 +0.0 1,389,464 - Psest_1284 0.88 +0.2 1,389,464 - Psest_1284 0.88 -1.7 1,389,464 - Psest_1284 0.88 +1.4 1,389,636 - +0.0 1,389,636 - +0.6 1,389,752 - +0.3 1,389,760 + -0.1 1,389,760 + +1.0 1,390,004 + Psest_1285 0.46 -1.3 1,390,004 + Psest_1285 0.46 -1.0 1,390,004 + Psest_1285 0.46 -0.2 1,390,004 + Psest_1285 0.46 -0.8 1,390,004 + Psest_1285 0.46 +0.8 1,390,004 + Psest_1285 0.46 +0.0 1,390,004 + Psest_1285 0.46 -0.7 1,390,004 + Psest_1285 0.46 -1.3 1,390,004 + Psest_1285 0.46 -0.5 1,390,004 + Psest_1285 0.46 -0.8 1,390,004 + Psest_1285 0.46 +1.8 1,390,005 - Psest_1285 0.46 -0.7 1,390,005 - Psest_1285 0.46 +0.0 1,390,005 - Psest_1285 0.46 +0.0 1,390,005 - Psest_1285 0.46 -0.6 1,390,005 - Psest_1285 0.46 -2.5 1,390,005 - Psest_1285 0.46 +0.6 1,390,005 - Psest_1285 0.46 +0.0 1,390,005 - Psest_1285 0.46 -0.6 1,390,005 - +0.0 1,390,005 - Psest_1285 0.46 -0.7 1,390,005 - Psest_1285 0.46 -2.2 1,390,006 + Psest_1285 0.46 +0.2 1,390,007 - Psest_1285 0.46 +0.2 1,390,335 + +0.3 1,390,336 - -1.0 1,390,351 - -0.2 1,390,351 - -1.0 1,391,980 + -0.3
Or see this region's nucleotide sequence