Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1033 and HP15_1034 are separated by 150 nucleotides HP15_1034 and HP15_1035 are separated by 102 nucleotides
HP15_1033: HP15_1033 - flavoprotein, NADB Rossmann superfamily, at 1,051,461 to 1,052,642
_1033
HP15_1034: HP15_1034 - Zn-dependent alcohol dehydrogenase, at 1,052,793 to 1,053,851
_1034
HP15_1035: HP15_1035 - phenazine biosynthesis protein, PhzF family, at 1,053,954 to 1,054,757
_1035
Position (kb)
1052
1053
1054 Strain fitness (log2 ratio)
-1
0
1
2 at 1051.793 kb on - strand, within HP15_1033 at 1051.798 kb on - strand, within HP15_1033 at 1051.798 kb on - strand, within HP15_1033 at 1051.887 kb on + strand, within HP15_1033 at 1051.933 kb on + strand, within HP15_1033 at 1052.071 kb on - strand, within HP15_1033 at 1052.077 kb on - strand, within HP15_1033 at 1052.187 kb on + strand, within HP15_1033 at 1052.397 kb on + strand, within HP15_1033 at 1052.410 kb on - strand, within HP15_1033 at 1052.415 kb on - strand, within HP15_1033 at 1052.555 kb on - strand at 1052.584 kb on + strand at 1052.589 kb on + strand at 1052.589 kb on + strand at 1052.589 kb on + strand at 1052.589 kb on + strand at 1052.592 kb on - strand at 1052.597 kb on - strand at 1052.646 kb on - strand at 1052.646 kb on - strand at 1052.646 kb on - strand at 1052.698 kb on + strand at 1052.784 kb on + strand at 1052.861 kb on + strand at 1052.878 kb on - strand at 1053.177 kb on - strand, within HP15_1034 at 1053.354 kb on + strand, within HP15_1034 at 1053.370 kb on + strand, within HP15_1034 at 1053.370 kb on + strand, within HP15_1034 at 1053.448 kb on - strand, within HP15_1034 at 1053.497 kb on - strand, within HP15_1034 at 1053.504 kb on + strand, within HP15_1034 at 1053.531 kb on - strand, within HP15_1034 at 1053.608 kb on + strand, within HP15_1034 at 1053.645 kb on - strand, within HP15_1034 at 1053.803 kb on + strand at 1053.941 kb on + strand at 1054.070 kb on + strand, within HP15_1035 at 1054.204 kb on + strand, within HP15_1035 at 1054.222 kb on - strand, within HP15_1035 at 1054.232 kb on + strand, within HP15_1035 at 1054.255 kb on - strand, within HP15_1035 at 1054.286 kb on + strand, within HP15_1035 at 1054.341 kb on + strand, within HP15_1035 at 1054.341 kb on + strand, within HP15_1035 at 1054.349 kb on - strand, within HP15_1035 at 1054.351 kb on + strand, within HP15_1035 at 1054.394 kb on - strand, within HP15_1035 at 1054.502 kb on - strand, within HP15_1035 at 1054.511 kb on - strand, within HP15_1035 at 1054.515 kb on + strand, within HP15_1035 at 1054.546 kb on + strand, within HP15_1035 at 1054.564 kb on - strand, within HP15_1035 at 1054.564 kb on - strand, within HP15_1035 at 1054.733 kb on - strand at 1054.747 kb on + strand at 1054.761 kb on - strand at 1054.838 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 1,051,793 - HP15_1033 0.28 +0.8 1,051,798 - HP15_1033 0.29 +1.2 1,051,798 - HP15_1033 0.29 +0.4 1,051,887 + HP15_1033 0.36 +0.9 1,051,933 + HP15_1033 0.40 +1.2 1,052,071 - HP15_1033 0.52 +0.3 1,052,077 - HP15_1033 0.52 +0.3 1,052,187 + HP15_1033 0.61 +0.7 1,052,397 + HP15_1033 0.79 +0.9 1,052,410 - HP15_1033 0.80 +1.0 1,052,415 - HP15_1033 0.81 -0.9 1,052,555 - +0.8 1,052,584 + +0.9 1,052,589 + +0.9 1,052,589 + +0.5 1,052,589 + +0.6 1,052,589 + +0.4 1,052,592 - +0.5 1,052,597 - -0.2 1,052,646 - +2.2 1,052,646 - +0.2 1,052,646 - +0.1 1,052,698 + +0.7 1,052,784 + +0.7 1,052,861 + -0.1 1,052,878 - -0.4 1,053,177 - HP15_1034 0.36 +0.6 1,053,354 + HP15_1034 0.53 +0.2 1,053,370 + HP15_1034 0.54 +0.5 1,053,370 + HP15_1034 0.54 +0.2 1,053,448 - HP15_1034 0.62 +1.4 1,053,497 - HP15_1034 0.66 -0.1 1,053,504 + HP15_1034 0.67 +0.3 1,053,531 - HP15_1034 0.70 +0.1 1,053,608 + HP15_1034 0.77 +0.1 1,053,645 - HP15_1034 0.80 +0.2 1,053,803 + -1.5 1,053,941 + +0.0 1,054,070 + HP15_1035 0.14 +0.4 1,054,204 + HP15_1035 0.31 +0.6 1,054,222 - HP15_1035 0.33 -0.2 1,054,232 + HP15_1035 0.35 -0.2 1,054,255 - HP15_1035 0.37 +0.3 1,054,286 + HP15_1035 0.41 +0.2 1,054,341 + HP15_1035 0.48 -0.7 1,054,341 + HP15_1035 0.48 +0.8 1,054,349 - HP15_1035 0.49 -0.1 1,054,351 + HP15_1035 0.49 -0.1 1,054,394 - HP15_1035 0.55 +0.7 1,054,502 - HP15_1035 0.68 +0.1 1,054,511 - HP15_1035 0.69 -1.7 1,054,515 + HP15_1035 0.70 -0.1 1,054,546 + HP15_1035 0.74 -0.4 1,054,564 - HP15_1035 0.76 +1.2 1,054,564 - HP15_1035 0.76 +0.5 1,054,733 - -0.4 1,054,747 + +0.3 1,054,761 - -0.9 1,054,838 - +0.4
Or see this region's nucleotide sequence