Strain Fitness in Marinobacter adhaerens HP15 around HP15_998

Experiment: m.b. Benzethonium chloride 0.025 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_997 and HP15_998 are separated by 21 nucleotidesHP15_998 and HP15_999 are separated by 251 nucleotides HP15_997: HP15_997 - conserved hypothetical protein, at 1,005,340 to 1,007,325 _997 HP15_998: HP15_998 - conserved hypothetical protein, at 1,007,347 to 1,007,934 _998 HP15_999: HP15_999 - acyl-CoA synthase, at 1,008,186 to 1,009,832 _999 Position (kb) 1007 1008Strain fitness (log2 ratio) -2 -1 0 1 2at 1006.421 kb on + strand, within HP15_997at 1006.421 kb on + strand, within HP15_997at 1006.425 kb on + strand, within HP15_997at 1006.429 kb on - strand, within HP15_997at 1006.439 kb on - strand, within HP15_997at 1006.556 kb on - strand, within HP15_997at 1006.613 kb on - strand, within HP15_997at 1006.739 kb on + strand, within HP15_997at 1006.765 kb on - strand, within HP15_997at 1006.795 kb on + strand, within HP15_997at 1006.797 kb on + strand, within HP15_997at 1007.001 kb on - strand, within HP15_997at 1007.065 kb on + strand, within HP15_997at 1007.211 kb on - strandat 1007.213 kb on - strandat 1007.232 kb on + strandat 1007.335 kb on - strandat 1007.336 kb on + strandat 1007.344 kb on - strandat 1007.446 kb on - strand, within HP15_998at 1007.602 kb on - strand, within HP15_998at 1007.727 kb on + strand, within HP15_998at 1007.796 kb on + strand, within HP15_998at 1007.838 kb on + strand, within HP15_998at 1007.865 kb on - strand, within HP15_998at 1007.955 kb on + strandat 1008.038 kb on - strandat 1008.272 kb on + strandat 1008.303 kb on - strandat 1008.310 kb on + strandat 1008.343 kb on + strandat 1008.462 kb on - strand, within HP15_999at 1008.522 kb on + strand, within HP15_999at 1008.591 kb on + strand, within HP15_999at 1008.770 kb on + strand, within HP15_999at 1008.778 kb on - strand, within HP15_999at 1008.778 kb on - strand, within HP15_999at 1008.783 kb on + strand, within HP15_999at 1008.804 kb on + strand, within HP15_999at 1008.931 kb on - strand, within HP15_999

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM
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1,006,421 + HP15_997 0.54 -0.1
1,006,421 + HP15_997 0.54 -0.3
1,006,425 + HP15_997 0.55 -1.1
1,006,429 - HP15_997 0.55 +1.2
1,006,439 - HP15_997 0.55 -0.2
1,006,556 - HP15_997 0.61 -0.0
1,006,613 - HP15_997 0.64 +0.4
1,006,739 + HP15_997 0.70 +0.7
1,006,765 - HP15_997 0.72 +0.2
1,006,795 + HP15_997 0.73 -0.1
1,006,797 + HP15_997 0.73 +0.4
1,007,001 - HP15_997 0.84 -1.3
1,007,065 + HP15_997 0.87 +0.5
1,007,211 - -0.2
1,007,213 - +0.5
1,007,232 + +1.2
1,007,335 - -0.3
1,007,336 + -0.5
1,007,344 - +1.2
1,007,446 - HP15_998 0.17 -0.4
1,007,602 - HP15_998 0.43 -0.0
1,007,727 + HP15_998 0.65 -1.9
1,007,796 + HP15_998 0.76 +2.2
1,007,838 + HP15_998 0.84 +0.3
1,007,865 - HP15_998 0.88 -1.8
1,007,955 + +1.0
1,008,038 - -0.2
1,008,272 + +1.2
1,008,303 - -0.5
1,008,310 + +0.1
1,008,343 + -0.6
1,008,462 - HP15_999 0.17 +0.1
1,008,522 + HP15_999 0.20 -0.4
1,008,591 + HP15_999 0.25 +0.1
1,008,770 + HP15_999 0.35 +0.4
1,008,778 - HP15_999 0.36 +1.3
1,008,778 - HP15_999 0.36 -0.1
1,008,783 + HP15_999 0.36 +1.1
1,008,804 + HP15_999 0.38 -0.1
1,008,931 - HP15_999 0.45 -0.3

Or see this region's nucleotide sequence