Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_982 and HP15_983 are separated by 191 nucleotides HP15_983 and HP15_984 are separated by 94 nucleotides
HP15_982: HP15_982 - conserved hypothetical protein, membrane, at 990,304 to 993,279
_982
HP15_983: HP15_983 - glyoxalase family protein, at 993,471 to 993,974
_983
HP15_984: HP15_984 - transcriptional regulator, LysR family protein, at 994,069 to 994,938
_984
Position (kb) 993
994 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 992.573 kb on - strand, within HP15_982 at 992.615 kb on - strand, within HP15_982 at 992.704 kb on + strand, within HP15_982 at 992.707 kb on - strand, within HP15_982 at 992.764 kb on - strand, within HP15_982 at 992.876 kb on + strand, within HP15_982 at 992.884 kb on - strand, within HP15_982 at 993.022 kb on + strand at 993.092 kb on - strand at 993.128 kb on - strand at 993.177 kb on + strand at 993.177 kb on + strand at 993.220 kb on - strand at 993.242 kb on + strand at 993.250 kb on - strand at 993.254 kb on + strand at 993.490 kb on + strand at 993.540 kb on + strand, within HP15_983 at 993.766 kb on + strand, within HP15_983 at 993.792 kb on + strand, within HP15_983 at 993.792 kb on + strand, within HP15_983 at 993.800 kb on - strand, within HP15_983 at 993.800 kb on - strand, within HP15_983 at 993.800 kb on - strand, within HP15_983 at 993.807 kb on + strand, within HP15_983 at 993.815 kb on - strand, within HP15_983 at 993.820 kb on - strand, within HP15_983 at 993.820 kb on - strand, within HP15_983 at 993.891 kb on - strand, within HP15_983 at 993.891 kb on - strand, within HP15_983 at 993.895 kb on + strand, within HP15_983 at 993.914 kb on + strand, within HP15_983 at 993.959 kb on + strand at 993.978 kb on - strand at 993.980 kb on + strand at 993.985 kb on + strand at 993.985 kb on + strand at 993.993 kb on - strand at 994.014 kb on - strand at 994.296 kb on + strand, within HP15_984 at 994.296 kb on + strand, within HP15_984 at 994.367 kb on + strand, within HP15_984 at 994.375 kb on - strand, within HP15_984 at 994.388 kb on - strand, within HP15_984 at 994.533 kb on - strand, within HP15_984 at 994.571 kb on - strand, within HP15_984 at 994.690 kb on - strand, within HP15_984 at 994.754 kb on + strand, within HP15_984 at 994.800 kb on - strand, within HP15_984 at 994.818 kb on + strand, within HP15_984 at 994.818 kb on + strand, within HP15_984 at 994.818 kb on + strand, within HP15_984 at 994.818 kb on + strand, within HP15_984 at 994.826 kb on - strand, within HP15_984 at 994.826 kb on - strand, within HP15_984 at 994.826 kb on - strand, within HP15_984 at 994.850 kb on + strand, within HP15_984
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 992,573 - HP15_982 0.76 +1.4 992,615 - HP15_982 0.78 -0.5 992,704 + HP15_982 0.81 -0.2 992,707 - HP15_982 0.81 +0.5 992,764 - HP15_982 0.83 +0.6 992,876 + HP15_982 0.86 +0.0 992,884 - HP15_982 0.87 +0.4 993,022 + +0.2 993,092 - -2.0 993,128 - +0.0 993,177 + -0.3 993,177 + -1.7 993,220 - +1.7 993,242 + +0.1 993,250 - -0.1 993,254 + +0.7 993,490 + +0.5 993,540 + HP15_983 0.14 -4.0 993,766 + HP15_983 0.59 -0.6 993,792 + HP15_983 0.64 +0.1 993,792 + HP15_983 0.64 +2.0 993,800 - HP15_983 0.65 +0.0 993,800 - HP15_983 0.65 -1.3 993,800 - HP15_983 0.65 -1.9 993,807 + HP15_983 0.67 -1.2 993,815 - HP15_983 0.68 +1.3 993,820 - HP15_983 0.69 -0.4 993,820 - HP15_983 0.69 +0.0 993,891 - HP15_983 0.83 +0.1 993,891 - HP15_983 0.83 -1.4 993,895 + HP15_983 0.84 +0.1 993,914 + HP15_983 0.88 +0.2 993,959 + +0.1 993,978 - -1.5 993,980 + -0.7 993,985 + -0.8 993,985 + +2.7 993,993 - -0.5 994,014 - +2.8 994,296 + HP15_984 0.26 +0.8 994,296 + HP15_984 0.26 +1.8 994,367 + HP15_984 0.34 +0.2 994,375 - HP15_984 0.35 -0.0 994,388 - HP15_984 0.37 +0.9 994,533 - HP15_984 0.53 -0.2 994,571 - HP15_984 0.58 +0.7 994,690 - HP15_984 0.71 -0.3 994,754 + HP15_984 0.79 +0.0 994,800 - HP15_984 0.84 +1.5 994,818 + HP15_984 0.86 -0.0 994,818 + HP15_984 0.86 -1.5 994,818 + HP15_984 0.86 +0.1 994,818 + HP15_984 0.86 +0.4 994,826 - HP15_984 0.87 -0.1 994,826 - HP15_984 0.87 -0.7 994,826 - HP15_984 0.87 +1.1 994,850 + HP15_984 0.90 -0.5
Or see this region's nucleotide sequence