Strain Fitness in Dechlorosoma suillum PS around Dsui_3482

Experiment: Anaero. lactate (C), nitrate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3481 and Dsui_3482 are separated by 91 nucleotidesDsui_3482 and Dsui_3483 are separated by 20 nucleotidesDsui_3483 and Dsui_3484 are separated by 112 nucleotides Dsui_3481: Dsui_3481 - aspartate ammonia-lyase, at 3,744,812 to 3,746,230 _3481 Dsui_3482: Dsui_3482 - Na+/H+ dicarboxylate symporter, at 3,746,322 to 3,747,635 _3482 Dsui_3483: Dsui_3483 - putative membrane protein required for alginate biosynthesis, at 3,747,656 to 3,748,001 _3483 Dsui_3484: Dsui_3484 - putative permease, at 3,748,114 to 3,748,881 _3484 Position (kb) 3746 3747 3748Strain fitness (log2 ratio) -2 -1 0 1at 3745.346 kb on - strandat 3745.348 kb on + strand, within Dsui_3481at 3745.348 kb on + strand, within Dsui_3481at 3745.394 kb on + strand, within Dsui_3481at 3745.428 kb on + strand, within Dsui_3481at 3745.542 kb on + strand, within Dsui_3481at 3745.555 kb on - strand, within Dsui_3481at 3745.607 kb on - strand, within Dsui_3481at 3745.627 kb on - strand, within Dsui_3481at 3745.635 kb on + strand, within Dsui_3481at 3745.681 kb on + strand, within Dsui_3481at 3745.713 kb on + strand, within Dsui_3481at 3745.721 kb on - strand, within Dsui_3481at 3745.827 kb on + strand, within Dsui_3481at 3745.882 kb on + strand, within Dsui_3481at 3745.914 kb on + strand, within Dsui_3481at 3745.932 kb on - strand, within Dsui_3481at 3745.956 kb on + strand, within Dsui_3481at 3746.056 kb on + strand, within Dsui_3481at 3746.491 kb on + strand, within Dsui_3482at 3746.501 kb on - strand, within Dsui_3482at 3746.694 kb on - strand, within Dsui_3482at 3746.721 kb on - strand, within Dsui_3482at 3746.721 kb on - strand, within Dsui_3482at 3746.867 kb on + strand, within Dsui_3482at 3747.015 kb on - strand, within Dsui_3482at 3747.245 kb on - strand, within Dsui_3482at 3747.252 kb on + strand, within Dsui_3482at 3747.259 kb on + strand, within Dsui_3482at 3747.262 kb on - strand, within Dsui_3482at 3747.612 kb on - strandat 3747.637 kb on - strandat 3747.667 kb on + strandat 3747.768 kb on + strand, within Dsui_3483at 3747.816 kb on - strand, within Dsui_3483at 3747.816 kb on - strand, within Dsui_3483at 3747.872 kb on + strand, within Dsui_3483at 3747.880 kb on - strand, within Dsui_3483at 3747.886 kb on + strand, within Dsui_3483at 3747.894 kb on - strand, within Dsui_3483at 3747.899 kb on - strand, within Dsui_3483at 3747.904 kb on + strand, within Dsui_3483at 3747.912 kb on - strand, within Dsui_3483at 3748.062 kb on - strandat 3748.238 kb on + strand, within Dsui_3484

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor
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3,745,346 - -0.1
3,745,348 + Dsui_3481 0.38 -0.2
3,745,348 + Dsui_3481 0.38 -0.1
3,745,394 + Dsui_3481 0.41 +0.1
3,745,428 + Dsui_3481 0.43 -0.1
3,745,542 + Dsui_3481 0.51 +0.2
3,745,555 - Dsui_3481 0.52 -0.2
3,745,607 - Dsui_3481 0.56 -0.0
3,745,627 - Dsui_3481 0.57 +0.8
3,745,635 + Dsui_3481 0.58 -0.1
3,745,681 + Dsui_3481 0.61 -0.0
3,745,713 + Dsui_3481 0.63 -0.0
3,745,721 - Dsui_3481 0.64 +0.3
3,745,827 + Dsui_3481 0.72 -0.3
3,745,882 + Dsui_3481 0.75 +0.2
3,745,914 + Dsui_3481 0.78 -0.2
3,745,932 - Dsui_3481 0.79 +0.0
3,745,956 + Dsui_3481 0.81 +0.4
3,746,056 + Dsui_3481 0.88 +0.2
3,746,491 + Dsui_3482 0.13 +0.6
3,746,501 - Dsui_3482 0.14 +0.0
3,746,694 - Dsui_3482 0.28 -0.0
3,746,721 - Dsui_3482 0.30 +0.5
3,746,721 - Dsui_3482 0.30 +0.0
3,746,867 + Dsui_3482 0.41 -0.3
3,747,015 - Dsui_3482 0.53 +1.2
3,747,245 - Dsui_3482 0.70 -0.2
3,747,252 + Dsui_3482 0.71 -0.2
3,747,259 + Dsui_3482 0.71 +0.4
3,747,262 - Dsui_3482 0.72 -0.1
3,747,612 - -0.2
3,747,637 - +0.5
3,747,667 + -0.1
3,747,768 + Dsui_3483 0.32 +0.3
3,747,816 - Dsui_3483 0.46 +0.3
3,747,816 - Dsui_3483 0.46 +0.2
3,747,872 + Dsui_3483 0.62 +0.3
3,747,880 - Dsui_3483 0.65 -0.5
3,747,886 + Dsui_3483 0.66 +0.0
3,747,894 - Dsui_3483 0.69 -0.4
3,747,899 - Dsui_3483 0.70 +1.2
3,747,904 + Dsui_3483 0.72 -0.1
3,747,912 - Dsui_3483 0.74 -0.3
3,748,062 - -2.0
3,748,238 + Dsui_3484 0.16 -0.1

Or see this region's nucleotide sequence