Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3481 and Dsui_3482 are separated by 91 nucleotides Dsui_3482 and Dsui_3483 are separated by 20 nucleotides Dsui_3483 and Dsui_3484 are separated by 112 nucleotides
Dsui_3481: Dsui_3481 - aspartate ammonia-lyase, at 3,744,812 to 3,746,230
_3481
Dsui_3482: Dsui_3482 - Na+/H+ dicarboxylate symporter, at 3,746,322 to 3,747,635
_3482
Dsui_3483: Dsui_3483 - putative membrane protein required for alginate biosynthesis, at 3,747,656 to 3,748,001
_3483
Dsui_3484: Dsui_3484 - putative permease, at 3,748,114 to 3,748,881
_3484
Position (kb)
3746
3747
3748 Strain fitness (log2 ratio)
-2
-1
0
1 at 3745.346 kb on - strand at 3745.348 kb on + strand, within Dsui_3481 at 3745.348 kb on + strand, within Dsui_3481 at 3745.394 kb on + strand, within Dsui_3481 at 3745.428 kb on + strand, within Dsui_3481 at 3745.542 kb on + strand, within Dsui_3481 at 3745.555 kb on - strand, within Dsui_3481 at 3745.607 kb on - strand, within Dsui_3481 at 3745.627 kb on - strand, within Dsui_3481 at 3745.635 kb on + strand, within Dsui_3481 at 3745.681 kb on + strand, within Dsui_3481 at 3745.713 kb on + strand, within Dsui_3481 at 3745.721 kb on - strand, within Dsui_3481 at 3745.827 kb on + strand, within Dsui_3481 at 3745.882 kb on + strand, within Dsui_3481 at 3745.914 kb on + strand, within Dsui_3481 at 3745.932 kb on - strand, within Dsui_3481 at 3745.956 kb on + strand, within Dsui_3481 at 3746.056 kb on + strand, within Dsui_3481 at 3746.491 kb on + strand, within Dsui_3482 at 3746.501 kb on - strand, within Dsui_3482 at 3746.694 kb on - strand, within Dsui_3482 at 3746.721 kb on - strand, within Dsui_3482 at 3746.721 kb on - strand, within Dsui_3482 at 3746.867 kb on + strand, within Dsui_3482 at 3747.015 kb on - strand, within Dsui_3482 at 3747.245 kb on - strand, within Dsui_3482 at 3747.252 kb on + strand, within Dsui_3482 at 3747.259 kb on + strand, within Dsui_3482 at 3747.262 kb on - strand, within Dsui_3482 at 3747.612 kb on - strand at 3747.637 kb on - strand at 3747.667 kb on + strand at 3747.768 kb on + strand, within Dsui_3483 at 3747.816 kb on - strand, within Dsui_3483 at 3747.816 kb on - strand, within Dsui_3483 at 3747.872 kb on + strand, within Dsui_3483 at 3747.880 kb on - strand, within Dsui_3483 at 3747.886 kb on + strand, within Dsui_3483 at 3747.894 kb on - strand, within Dsui_3483 at 3747.899 kb on - strand, within Dsui_3483 at 3747.904 kb on + strand, within Dsui_3483 at 3747.912 kb on - strand, within Dsui_3483 at 3748.062 kb on - strand at 3748.238 kb on + strand, within Dsui_3484
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 3,745,346 - -0.1 3,745,348 + Dsui_3481 0.38 -0.2 3,745,348 + Dsui_3481 0.38 -0.1 3,745,394 + Dsui_3481 0.41 +0.1 3,745,428 + Dsui_3481 0.43 -0.1 3,745,542 + Dsui_3481 0.51 +0.2 3,745,555 - Dsui_3481 0.52 -0.2 3,745,607 - Dsui_3481 0.56 -0.0 3,745,627 - Dsui_3481 0.57 +0.8 3,745,635 + Dsui_3481 0.58 -0.1 3,745,681 + Dsui_3481 0.61 -0.0 3,745,713 + Dsui_3481 0.63 -0.0 3,745,721 - Dsui_3481 0.64 +0.3 3,745,827 + Dsui_3481 0.72 -0.3 3,745,882 + Dsui_3481 0.75 +0.2 3,745,914 + Dsui_3481 0.78 -0.2 3,745,932 - Dsui_3481 0.79 +0.0 3,745,956 + Dsui_3481 0.81 +0.4 3,746,056 + Dsui_3481 0.88 +0.2 3,746,491 + Dsui_3482 0.13 +0.6 3,746,501 - Dsui_3482 0.14 +0.0 3,746,694 - Dsui_3482 0.28 -0.0 3,746,721 - Dsui_3482 0.30 +0.5 3,746,721 - Dsui_3482 0.30 +0.0 3,746,867 + Dsui_3482 0.41 -0.3 3,747,015 - Dsui_3482 0.53 +1.2 3,747,245 - Dsui_3482 0.70 -0.2 3,747,252 + Dsui_3482 0.71 -0.2 3,747,259 + Dsui_3482 0.71 +0.4 3,747,262 - Dsui_3482 0.72 -0.1 3,747,612 - -0.2 3,747,637 - +0.5 3,747,667 + -0.1 3,747,768 + Dsui_3483 0.32 +0.3 3,747,816 - Dsui_3483 0.46 +0.3 3,747,816 - Dsui_3483 0.46 +0.2 3,747,872 + Dsui_3483 0.62 +0.3 3,747,880 - Dsui_3483 0.65 -0.5 3,747,886 + Dsui_3483 0.66 +0.0 3,747,894 - Dsui_3483 0.69 -0.4 3,747,899 - Dsui_3483 0.70 +1.2 3,747,904 + Dsui_3483 0.72 -0.1 3,747,912 - Dsui_3483 0.74 -0.3 3,748,062 - -2.0 3,748,238 + Dsui_3484 0.16 -0.1
Or see this region's nucleotide sequence