Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2819 and Dsui_2820 are separated by 1 nucleotides Dsui_2820 and Dsui_2821 are separated by 67 nucleotides Dsui_2821 and Dsui_2822 overlap by 4 nucleotides Dsui_2822 and Dsui_2823 are separated by 73 nucleotides
Dsui_2819: Dsui_2819 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,995,600 to 2,996,373
_2819
Dsui_2820: Dsui_2820 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,996,375 to 2,997,280
_2820
Dsui_2821: Dsui_2821 - K+ transport system, NAD-binding component, at 2,997,348 to 2,998,385
_2821
Dsui_2822: Dsui_2822 - hypothetical protein, at 2,998,382 to 2,998,951
_2822
Dsui_2823: Dsui_2823 - DNA internalization-related competence protein ComEC/Rec2, at 2,999,025 to 3,000,758
_2823
Position (kb)
2997
2998
2999 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2996.364 kb on - strand at 2996.436 kb on - strand at 2996.476 kb on - strand, within Dsui_2820 at 2996.664 kb on - strand, within Dsui_2820 at 2996.676 kb on + strand at 2996.769 kb on - strand, within Dsui_2820 at 2996.851 kb on + strand at 2996.928 kb on - strand, within Dsui_2820 at 2997.033 kb on + strand at 2997.120 kb on - strand, within Dsui_2820 at 2997.139 kb on + strand at 2997.195 kb on - strand at 2997.195 kb on - strand at 2997.205 kb on - strand at 2997.262 kb on + strand at 2997.297 kb on - strand at 2997.512 kb on + strand at 2997.520 kb on - strand, within Dsui_2821 at 2997.629 kb on + strand at 2997.637 kb on - strand, within Dsui_2821 at 2997.637 kb on - strand at 2997.704 kb on + strand at 2997.828 kb on - strand, within Dsui_2821 at 2997.998 kb on - strand, within Dsui_2821 at 2998.212 kb on - strand, within Dsui_2821 at 2998.323 kb on + strand at 2998.333 kb on + strand at 2998.490 kb on - strand, within Dsui_2822 at 2998.534 kb on - strand, within Dsui_2822 at 2998.647 kb on - strand, within Dsui_2822 at 2998.697 kb on + strand at 2998.939 kb on - strand at 2998.983 kb on + strand at 2998.983 kb on + strand at 2998.991 kb on - strand at 2999.037 kb on + strand at 2999.256 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 2,996,364 - -0.9 2,996,436 - +0.6 2,996,476 - Dsui_2820 0.11 -0.5 2,996,664 - Dsui_2820 0.32 -1.0 2,996,676 + +1.5 2,996,769 - Dsui_2820 0.43 -0.4 2,996,851 + -0.6 2,996,928 - Dsui_2820 0.61 +0.4 2,997,033 + +1.9 2,997,120 - Dsui_2820 0.82 -0.1 2,997,139 + +1.9 2,997,195 - +0.0 2,997,195 - +0.3 2,997,205 - +0.7 2,997,262 + +0.6 2,997,297 - +0.3 2,997,512 + +2.9 2,997,520 - Dsui_2821 0.17 -0.6 2,997,629 + +1.9 2,997,637 - Dsui_2821 0.28 +0.4 2,997,637 - -0.6 2,997,704 + +1.4 2,997,828 - Dsui_2821 0.46 -0.9 2,997,998 - Dsui_2821 0.63 -0.5 2,998,212 - Dsui_2821 0.83 -0.6 2,998,323 + +0.9 2,998,333 + +0.9 2,998,490 - Dsui_2822 0.19 -0.2 2,998,534 - Dsui_2822 0.27 -0.9 2,998,647 - Dsui_2822 0.46 -0.2 2,998,697 + +1.9 2,998,939 - -1.0 2,998,983 + +2.9 2,998,983 + +1.9 2,998,991 - -0.3 2,999,037 + +0.9 2,999,256 - +0.6
Or see this region's nucleotide sequence