Strain Fitness in Dechlorosoma suillum PS around Dsui_2767

Experiment: Anaero. lactate (C), nitrate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2766 and Dsui_2767 are separated by 67 nucleotidesDsui_2767 and Dsui_2768 are separated by 109 nucleotides Dsui_2766: Dsui_2766 - putative homoserine kinase type II (protein kinase fold), at 2,924,302 to 2,925,309 _2766 Dsui_2767: Dsui_2767 - glutaredoxin-like protein, at 2,925,377 to 2,925,763 _2767 Dsui_2768: Dsui_2768 - uncharacterized protein involved in outer membrane biogenesis, at 2,925,873 to 2,926,982 _2768 Position (kb) 2925 2926Strain fitness (log2 ratio) -1 0 1 2at 2924.484 kb on + strand, within Dsui_2766at 2924.610 kb on - strandat 2924.784 kb on + strand, within Dsui_2766at 2924.868 kb on - strandat 2924.944 kb on + strand, within Dsui_2766at 2925.008 kb on + strand, within Dsui_2766at 2925.107 kb on + strand, within Dsui_2766at 2925.210 kb on + strandat 2925.233 kb on + strandat 2925.290 kb on + strandat 2925.290 kb on + strandat 2925.290 kb on + strandat 2925.305 kb on + strandat 2925.313 kb on - strandat 2925.362 kb on + strandat 2925.370 kb on - strandat 2925.475 kb on + strandat 2925.503 kb on + strand, within Dsui_2767at 2925.565 kb on + strand, within Dsui_2767at 2925.565 kb on + strand, within Dsui_2767at 2925.575 kb on + strand, within Dsui_2767at 2925.575 kb on + strand, within Dsui_2767at 2925.583 kb on - strandat 2925.916 kb on + strandat 2925.918 kb on - strandat 2925.990 kb on + strand, within Dsui_2768at 2926.030 kb on + strand, within Dsui_2768at 2926.097 kb on + strand, within Dsui_2768at 2926.271 kb on - strandat 2926.311 kb on + strand, within Dsui_2768at 2926.385 kb on + strand, within Dsui_2768at 2926.393 kb on - strand, within Dsui_2768at 2926.451 kb on - strandat 2926.496 kb on + strandat 2926.532 kb on + strand, within Dsui_2768at 2926.532 kb on + strandat 2926.540 kb on - strandat 2926.655 kb on + strand, within Dsui_2768

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor
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2,924,484 + Dsui_2766 0.18 -0.7
2,924,610 - +0.3
2,924,784 + Dsui_2766 0.48 +0.9
2,924,868 - +2.3
2,924,944 + Dsui_2766 0.64 -0.4
2,925,008 + Dsui_2766 0.70 -0.3
2,925,107 + Dsui_2766 0.80 +0.2
2,925,210 + +1.1
2,925,233 + +0.1
2,925,290 + -0.3
2,925,290 + +0.3
2,925,290 + +1.6
2,925,305 + -0.1
2,925,313 - -0.7
2,925,362 + -0.3
2,925,370 - +0.9
2,925,475 + -0.4
2,925,503 + Dsui_2767 0.33 -0.1
2,925,565 + Dsui_2767 0.49 -0.9
2,925,565 + Dsui_2767 0.49 -1.2
2,925,575 + Dsui_2767 0.51 -1.0
2,925,575 + Dsui_2767 0.51 -1.7
2,925,583 - -0.1
2,925,916 + +1.7
2,925,918 - +0.3
2,925,990 + Dsui_2768 0.11 +0.3
2,926,030 + Dsui_2768 0.14 +0.3
2,926,097 + Dsui_2768 0.20 -0.3
2,926,271 - +0.9
2,926,311 + Dsui_2768 0.39 +0.1
2,926,385 + Dsui_2768 0.46 -1.4
2,926,393 - Dsui_2768 0.47 -0.1
2,926,451 - +1.5
2,926,496 + +1.3
2,926,532 + Dsui_2768 0.59 +0.1
2,926,532 + -0.1
2,926,540 - -0.9
2,926,655 + Dsui_2768 0.70 -0.9

Or see this region's nucleotide sequence