Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2751 and Dsui_2752 are separated by 300 nucleotides Dsui_2752 and Dsui_2753 are separated by 5 nucleotides Dsui_2753 and Dsui_2754 are separated by 262 nucleotides
Dsui_2751: Dsui_2751 - cyanophycin synthetase, at 2,908,277 to 2,910,445
_2751
Dsui_2752: Dsui_2752 - ABC-type multidrug transport system, ATPase and permease component, at 2,910,746 to 2,912,953
_2752
Dsui_2753: Dsui_2753 - protein of unknown function (DUF1854), at 2,912,959 to 2,913,429
_2753
Dsui_2754: Dsui_2754 - collagenase-like protease, at 2,913,692 to 2,915,578
_2754
Position (kb)
2910
2911
2912
2913 Strain fitness (log2 ratio)
-1
0
1
2 at 2909.886 kb on + strand at 2909.953 kb on + strand at 2910.063 kb on - strand, within Dsui_2751 at 2910.098 kb on - strand, within Dsui_2751 at 2910.183 kb on - strand, within Dsui_2751 at 2910.258 kb on - strand at 2910.286 kb on + strand at 2910.294 kb on - strand at 2910.392 kb on - strand at 2910.392 kb on - strand at 2910.407 kb on - strand at 2910.414 kb on - strand at 2910.448 kb on - strand at 2910.449 kb on - strand at 2910.488 kb on - strand at 2910.488 kb on - strand at 2910.488 kb on - strand at 2910.488 kb on - strand at 2910.547 kb on + strand at 2910.555 kb on - strand at 2910.555 kb on - strand at 2910.555 kb on - strand at 2910.573 kb on + strand at 2910.581 kb on - strand at 2910.589 kb on + strand at 2910.589 kb on + strand at 2910.597 kb on - strand at 2910.651 kb on + strand at 2910.651 kb on + strand at 2911.316 kb on + strand, within Dsui_2752 at 2911.414 kb on + strand, within Dsui_2752 at 2912.050 kb on + strand, within Dsui_2752 at 2912.164 kb on + strand, within Dsui_2752 at 2912.382 kb on + strand, within Dsui_2752 at 2912.382 kb on + strand, within Dsui_2752 at 2912.890 kb on + strand at 2912.890 kb on + strand at 2913.583 kb on + strand at 2913.583 kb on + strand at 2913.617 kb on - strand at 2913.622 kb on - strand at 2913.644 kb on + strand at 2913.662 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 2,909,886 + +0.6 2,909,953 + -0.1 2,910,063 - Dsui_2751 0.82 -0.3 2,910,098 - Dsui_2751 0.84 -0.2 2,910,183 - Dsui_2751 0.88 +0.3 2,910,258 - -0.2 2,910,286 + -0.1 2,910,294 - -0.7 2,910,392 - +0.1 2,910,392 - +0.4 2,910,407 - -0.3 2,910,414 - -0.4 2,910,448 - +0.3 2,910,449 - -0.1 2,910,488 - -0.6 2,910,488 - +0.2 2,910,488 - -0.2 2,910,488 - -0.4 2,910,547 + +0.2 2,910,555 - -0.2 2,910,555 - -0.2 2,910,555 - +1.0 2,910,573 + -0.9 2,910,581 - +0.3 2,910,589 + -0.0 2,910,589 + -0.3 2,910,597 - -0.2 2,910,651 + +1.1 2,910,651 + -0.9 2,911,316 + Dsui_2752 0.26 -1.4 2,911,414 + Dsui_2752 0.30 -0.4 2,912,050 + Dsui_2752 0.59 -1.7 2,912,164 + Dsui_2752 0.64 +0.1 2,912,382 + Dsui_2752 0.74 +0.9 2,912,382 + Dsui_2752 0.74 +2.3 2,912,890 + -0.3 2,912,890 + +0.3 2,913,583 + -0.8 2,913,583 + +0.0 2,913,617 - +0.8 2,913,622 - -0.5 2,913,644 + +0.3 2,913,662 - -0.1
Or see this region's nucleotide sequence