Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2622 and Dsui_2623 are separated by 140 nucleotides Dsui_2623 and Dsui_2625 are separated by 674 nucleotides
Dsui_2622: Dsui_2622 - uncharacterized protein involved in exopolysaccharide biosynthesis, at 2,775,064 to 2,776,170
_2622
Dsui_2623: Dsui_2623 - site-specific recombinase XerD, at 2,776,311 to 2,777,489
_2623
Dsui_2625: Dsui_2625 - hypothetical protein, at 2,778,164 to 2,778,934
_2625
Position (kb)
2776
2777
2778 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2775.380 kb on - strand, within Dsui_2622 at 2775.408 kb on - strand, within Dsui_2622 at 2775.452 kb on + strand, within Dsui_2622 at 2775.460 kb on - strand, within Dsui_2622 at 2775.460 kb on - strand, within Dsui_2622 at 2775.487 kb on - strand, within Dsui_2622 at 2775.561 kb on + strand, within Dsui_2622 at 2775.666 kb on - strand, within Dsui_2622 at 2775.679 kb on + strand, within Dsui_2622 at 2775.681 kb on + strand, within Dsui_2622 at 2775.687 kb on - strand, within Dsui_2622 at 2775.702 kb on + strand, within Dsui_2622 at 2775.707 kb on + strand, within Dsui_2622 at 2775.719 kb on + strand, within Dsui_2622 at 2775.719 kb on + strand, within Dsui_2622 at 2775.719 kb on + strand, within Dsui_2622 at 2775.719 kb on + strand, within Dsui_2622 at 2775.725 kb on - strand, within Dsui_2622 at 2775.808 kb on + strand, within Dsui_2622 at 2775.808 kb on + strand, within Dsui_2622 at 2775.811 kb on - strand, within Dsui_2622 at 2775.821 kb on + strand at 2775.829 kb on - strand, within Dsui_2622 at 2775.829 kb on - strand, within Dsui_2622 at 2775.833 kb on + strand, within Dsui_2622 at 2775.841 kb on - strand, within Dsui_2622 at 2775.875 kb on + strand, within Dsui_2622 at 2775.875 kb on + strand, within Dsui_2622 at 2775.875 kb on + strand, within Dsui_2622 at 2775.883 kb on - strand, within Dsui_2622 at 2775.883 kb on - strand, within Dsui_2622 at 2775.973 kb on + strand, within Dsui_2622 at 2775.973 kb on + strand at 2775.981 kb on - strand, within Dsui_2622 at 2775.981 kb on - strand, within Dsui_2622 at 2775.991 kb on - strand, within Dsui_2622 at 2776.010 kb on - strand, within Dsui_2622 at 2776.016 kb on - strand, within Dsui_2622 at 2776.032 kb on + strand, within Dsui_2622 at 2776.035 kb on - strand, within Dsui_2622 at 2776.035 kb on - strand, within Dsui_2622 at 2776.037 kb on + strand, within Dsui_2622 at 2776.042 kb on + strand, within Dsui_2622 at 2776.044 kb on + strand, within Dsui_2622 at 2776.051 kb on + strand, within Dsui_2622 at 2776.052 kb on - strand, within Dsui_2622 at 2776.056 kb on + strand, within Dsui_2622 at 2776.059 kb on - strand, within Dsui_2622 at 2776.059 kb on - strand, within Dsui_2622 at 2776.063 kb on - strand at 2776.064 kb on - strand at 2776.064 kb on - strand at 2776.086 kb on + strand at 2776.088 kb on + strand at 2776.095 kb on - strand at 2776.099 kb on + strand at 2776.105 kb on + strand at 2776.105 kb on + strand at 2776.105 kb on + strand at 2776.105 kb on + strand at 2776.105 kb on + strand at 2776.113 kb on - strand at 2776.113 kb on - strand at 2776.113 kb on - strand at 2776.113 kb on - strand at 2776.126 kb on - strand at 2776.133 kb on + strand at 2776.134 kb on + strand at 2776.136 kb on + strand at 2776.142 kb on - strand at 2776.144 kb on - strand at 2776.144 kb on - strand at 2776.153 kb on - strand at 2776.156 kb on + strand at 2776.156 kb on + strand at 2776.156 kb on + strand at 2776.164 kb on - strand at 2776.164 kb on - strand at 2776.178 kb on - strand at 2776.191 kb on - strand at 2776.194 kb on + strand at 2776.195 kb on - strand at 2776.202 kb on - strand at 2776.251 kb on + strand at 2776.251 kb on + strand at 2776.271 kb on + strand at 2776.273 kb on - strand at 2776.278 kb on + strand at 2776.279 kb on - strand at 2776.286 kb on - strand at 2776.293 kb on - strand at 2776.293 kb on - strand at 2776.334 kb on + strand at 2776.334 kb on + strand at 2776.344 kb on + strand at 2776.355 kb on + strand at 2776.367 kb on + strand at 2776.383 kb on + strand at 2776.383 kb on + strand at 2776.426 kb on + strand at 2776.461 kb on - strand, within Dsui_2623 at 2776.499 kb on + strand, within Dsui_2623 at 2776.507 kb on - strand, within Dsui_2623 at 2776.528 kb on - strand, within Dsui_2623 at 2776.533 kb on - strand, within Dsui_2623 at 2776.548 kb on + strand, within Dsui_2623 at 2776.550 kb on + strand, within Dsui_2623 at 2776.556 kb on - strand, within Dsui_2623 at 2776.556 kb on - strand, within Dsui_2623 at 2776.556 kb on - strand, within Dsui_2623 at 2776.557 kb on + strand, within Dsui_2623 at 2776.560 kb on - strand, within Dsui_2623 at 2776.595 kb on - strand, within Dsui_2623 at 2776.702 kb on + strand, within Dsui_2623 at 2776.702 kb on + strand, within Dsui_2623 at 2776.702 kb on + strand, within Dsui_2623 at 2776.776 kb on + strand, within Dsui_2623 at 2776.776 kb on + strand, within Dsui_2623 at 2776.784 kb on - strand, within Dsui_2623 at 2776.784 kb on - strand, within Dsui_2623 at 2776.784 kb on - strand, within Dsui_2623 at 2776.811 kb on - strand, within Dsui_2623 at 2776.831 kb on + strand, within Dsui_2623 at 2776.837 kb on + strand, within Dsui_2623 at 2776.837 kb on + strand, within Dsui_2623 at 2776.839 kb on - strand, within Dsui_2623 at 2776.845 kb on - strand, within Dsui_2623 at 2776.845 kb on - strand, within Dsui_2623 at 2776.845 kb on - strand, within Dsui_2623 at 2776.929 kb on + strand, within Dsui_2623 at 2776.940 kb on + strand, within Dsui_2623 at 2776.940 kb on + strand, within Dsui_2623 at 2776.940 kb on + strand, within Dsui_2623 at 2776.940 kb on + strand, within Dsui_2623 at 2776.940 kb on + strand, within Dsui_2623 at 2776.948 kb on - strand, within Dsui_2623 at 2776.948 kb on - strand, within Dsui_2623 at 2777.020 kb on + strand, within Dsui_2623 at 2777.027 kb on - strand, within Dsui_2623 at 2777.075 kb on - strand, within Dsui_2623 at 2777.095 kb on + strand, within Dsui_2623 at 2777.103 kb on - strand, within Dsui_2623 at 2777.121 kb on + strand, within Dsui_2623 at 2777.125 kb on - strand, within Dsui_2623 at 2777.140 kb on + strand, within Dsui_2623 at 2777.140 kb on + strand, within Dsui_2623 at 2777.146 kb on + strand, within Dsui_2623 at 2777.149 kb on - strand, within Dsui_2623 at 2777.149 kb on - strand, within Dsui_2623 at 2777.161 kb on + strand, within Dsui_2623 at 2777.196 kb on + strand, within Dsui_2623 at 2777.204 kb on - strand, within Dsui_2623 at 2777.209 kb on - strand, within Dsui_2623 at 2777.245 kb on + strand, within Dsui_2623 at 2777.247 kb on + strand, within Dsui_2623 at 2777.331 kb on - strand, within Dsui_2623 at 2777.379 kb on + strand at 2777.419 kb on + strand at 2777.425 kb on + strand at 2777.484 kb on - strand at 2777.600 kb on - strand at 2777.632 kb on + strand at 2777.645 kb on + strand at 2777.715 kb on + strand at 2777.715 kb on + strand at 2777.719 kb on - strand at 2777.723 kb on - strand at 2777.725 kb on + strand at 2777.737 kb on + strand at 2777.742 kb on - strand at 2777.763 kb on - strand at 2777.763 kb on - strand at 2777.809 kb on + strand at 2777.809 kb on + strand at 2777.809 kb on + strand at 2777.809 kb on + strand at 2777.809 kb on + strand at 2777.809 kb on + strand at 2777.812 kb on - strand at 2777.817 kb on - strand at 2777.817 kb on - strand at 2777.817 kb on - strand at 2777.819 kb on + strand at 2777.819 kb on + strand at 2777.819 kb on + strand at 2777.856 kb on + strand at 2777.857 kb on - strand at 2777.864 kb on - strand at 2777.864 kb on - strand at 2777.891 kb on - strand at 2777.893 kb on - strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.916 kb on + strand at 2777.919 kb on - strand at 2777.954 kb on - strand at 2777.965 kb on + strand at 2777.965 kb on + strand at 2778.008 kb on - strand at 2778.009 kb on - strand at 2778.009 kb on - strand at 2778.011 kb on + strand at 2778.011 kb on + strand at 2778.011 kb on + strand at 2778.071 kb on + strand at 2778.079 kb on + strand at 2778.079 kb on + strand at 2778.079 kb on + strand at 2778.086 kb on - strand at 2778.087 kb on - strand at 2778.092 kb on + strand at 2778.130 kb on - strand at 2778.174 kb on - strand at 2778.179 kb on + strand at 2778.184 kb on + strand at 2778.184 kb on + strand at 2778.184 kb on + strand at 2778.192 kb on - strand at 2778.192 kb on - strand at 2778.192 kb on - strand at 2778.192 kb on - strand at 2778.192 kb on - strand at 2778.219 kb on - strand at 2778.242 kb on - strand, within Dsui_2625 at 2778.247 kb on + strand, within Dsui_2625 at 2778.257 kb on + strand, within Dsui_2625 at 2778.265 kb on - strand, within Dsui_2625 at 2778.267 kb on + strand, within Dsui_2625 at 2778.282 kb on - strand, within Dsui_2625 at 2778.329 kb on + strand, within Dsui_2625 at 2778.334 kb on - strand, within Dsui_2625 at 2778.342 kb on - strand, within Dsui_2625 at 2778.343 kb on + strand, within Dsui_2625 at 2778.351 kb on - strand, within Dsui_2625 at 2778.353 kb on + strand, within Dsui_2625 at 2778.356 kb on - strand, within Dsui_2625 at 2778.359 kb on + strand, within Dsui_2625 at 2778.378 kb on + strand, within Dsui_2625 at 2778.378 kb on + strand, within Dsui_2625 at 2778.378 kb on + strand, within Dsui_2625 at 2778.386 kb on - strand, within Dsui_2625 at 2778.386 kb on - strand, within Dsui_2625 at 2778.386 kb on - strand, within Dsui_2625 at 2778.406 kb on + strand, within Dsui_2625 at 2778.406 kb on + strand, within Dsui_2625 at 2778.414 kb on - strand, within Dsui_2625 at 2778.414 kb on - strand, within Dsui_2625 at 2778.414 kb on - strand, within Dsui_2625
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 2,775,380 - Dsui_2622 0.29 +0.3 2,775,408 - Dsui_2622 0.31 +0.2 2,775,452 + Dsui_2622 0.35 +0.1 2,775,460 - Dsui_2622 0.36 +0.1 2,775,460 - Dsui_2622 0.36 +0.5 2,775,487 - Dsui_2622 0.38 +0.1 2,775,561 + Dsui_2622 0.45 -0.1 2,775,666 - Dsui_2622 0.54 +0.1 2,775,679 + Dsui_2622 0.56 +0.5 2,775,681 + Dsui_2622 0.56 -0.6 2,775,687 - Dsui_2622 0.56 +0.2 2,775,702 + Dsui_2622 0.58 +0.6 2,775,707 + Dsui_2622 0.58 -0.1 2,775,719 + Dsui_2622 0.59 -1.0 2,775,719 + Dsui_2622 0.59 -0.4 2,775,719 + Dsui_2622 0.59 -0.4 2,775,719 + Dsui_2622 0.59 -0.5 2,775,725 - Dsui_2622 0.60 -0.2 2,775,808 + Dsui_2622 0.67 -0.1 2,775,808 + Dsui_2622 0.67 +1.1 2,775,811 - Dsui_2622 0.67 +0.2 2,775,821 + -0.6 2,775,829 - Dsui_2622 0.69 +0.1 2,775,829 - Dsui_2622 0.69 +0.2 2,775,833 + Dsui_2622 0.69 -0.3 2,775,841 - Dsui_2622 0.70 +0.3 2,775,875 + Dsui_2622 0.73 -0.3 2,775,875 + Dsui_2622 0.73 +1.2 2,775,875 + Dsui_2622 0.73 -0.1 2,775,883 - Dsui_2622 0.74 +0.0 2,775,883 - Dsui_2622 0.74 +0.4 2,775,973 + Dsui_2622 0.82 +0.2 2,775,973 + +0.1 2,775,981 - Dsui_2622 0.83 +0.1 2,775,981 - Dsui_2622 0.83 +0.4 2,775,991 - Dsui_2622 0.84 +0.1 2,776,010 - Dsui_2622 0.85 -0.4 2,776,016 - Dsui_2622 0.86 +0.2 2,776,032 + Dsui_2622 0.87 -0.1 2,776,035 - Dsui_2622 0.88 -0.2 2,776,035 - Dsui_2622 0.88 +0.1 2,776,037 + Dsui_2622 0.88 +0.1 2,776,042 + Dsui_2622 0.88 -0.6 2,776,044 + Dsui_2622 0.89 -0.6 2,776,051 + Dsui_2622 0.89 +0.0 2,776,052 - Dsui_2622 0.89 +0.0 2,776,056 + Dsui_2622 0.90 +0.2 2,776,059 - Dsui_2622 0.90 -0.6 2,776,059 - Dsui_2622 0.90 +0.2 2,776,063 - -0.4 2,776,064 - +0.2 2,776,064 - -0.2 2,776,086 + -0.3 2,776,088 + -0.1 2,776,095 - +0.2 2,776,099 + -0.8 2,776,105 + -0.9 2,776,105 + -1.2 2,776,105 + -1.9 2,776,105 + -2.4 2,776,105 + -1.2 2,776,113 - -0.1 2,776,113 - +0.0 2,776,113 - -0.2 2,776,113 - -0.1 2,776,126 - +0.3 2,776,133 + -0.3 2,776,134 + -0.2 2,776,136 + -0.2 2,776,142 - +0.0 2,776,144 - -0.1 2,776,144 - +0.1 2,776,153 - +0.4 2,776,156 + +0.5 2,776,156 + +0.1 2,776,156 + +1.9 2,776,164 - +0.3 2,776,164 - -0.9 2,776,178 - -0.5 2,776,191 - +0.1 2,776,194 + +0.2 2,776,195 - -0.4 2,776,202 - +0.1 2,776,251 + +0.2 2,776,251 + +0.5 2,776,271 + +0.0 2,776,273 - +0.4 2,776,278 + +0.0 2,776,279 - -0.1 2,776,286 - -0.5 2,776,293 - -0.2 2,776,293 - -1.0 2,776,334 + -0.0 2,776,334 + +0.4 2,776,344 + +0.3 2,776,355 + +0.2 2,776,367 + +0.2 2,776,383 + +0.7 2,776,383 + +0.3 2,776,426 + +0.3 2,776,461 - Dsui_2623 0.13 -0.3 2,776,499 + Dsui_2623 0.16 +0.4 2,776,507 - Dsui_2623 0.17 -0.3 2,776,528 - Dsui_2623 0.18 +0.1 2,776,533 - Dsui_2623 0.19 -0.2 2,776,548 + Dsui_2623 0.20 -0.1 2,776,550 + Dsui_2623 0.20 -0.1 2,776,556 - Dsui_2623 0.21 +0.5 2,776,556 - Dsui_2623 0.21 -0.5 2,776,556 - Dsui_2623 0.21 -0.2 2,776,557 + Dsui_2623 0.21 +0.2 2,776,560 - Dsui_2623 0.21 -0.6 2,776,595 - Dsui_2623 0.24 +0.2 2,776,702 + Dsui_2623 0.33 +0.3 2,776,702 + Dsui_2623 0.33 -0.0 2,776,702 + Dsui_2623 0.33 +0.4 2,776,776 + Dsui_2623 0.39 +0.3 2,776,776 + Dsui_2623 0.39 +0.2 2,776,784 - Dsui_2623 0.40 -0.0 2,776,784 - Dsui_2623 0.40 -0.5 2,776,784 - Dsui_2623 0.40 +1.2 2,776,811 - Dsui_2623 0.42 +0.2 2,776,831 + Dsui_2623 0.44 +0.2 2,776,837 + Dsui_2623 0.45 -0.1 2,776,837 + Dsui_2623 0.45 +0.2 2,776,839 - Dsui_2623 0.45 +0.2 2,776,845 - Dsui_2623 0.45 -0.9 2,776,845 - Dsui_2623 0.45 +0.0 2,776,845 - Dsui_2623 0.45 -0.2 2,776,929 + Dsui_2623 0.52 +0.2 2,776,940 + Dsui_2623 0.53 -0.1 2,776,940 + Dsui_2623 0.53 -0.2 2,776,940 + Dsui_2623 0.53 -0.0 2,776,940 + Dsui_2623 0.53 +0.3 2,776,940 + Dsui_2623 0.53 +0.2 2,776,948 - Dsui_2623 0.54 +0.5 2,776,948 - Dsui_2623 0.54 +0.3 2,777,020 + Dsui_2623 0.60 +0.2 2,777,027 - Dsui_2623 0.61 -0.1 2,777,075 - Dsui_2623 0.65 +0.0 2,777,095 + Dsui_2623 0.66 +0.2 2,777,103 - Dsui_2623 0.67 -0.0 2,777,121 + Dsui_2623 0.69 +0.2 2,777,125 - Dsui_2623 0.69 -0.2 2,777,140 + Dsui_2623 0.70 +0.2 2,777,140 + Dsui_2623 0.70 +0.2 2,777,146 + Dsui_2623 0.71 +0.2 2,777,149 - Dsui_2623 0.71 -0.0 2,777,149 - Dsui_2623 0.71 -0.1 2,777,161 + Dsui_2623 0.72 +0.3 2,777,196 + Dsui_2623 0.75 +0.3 2,777,204 - Dsui_2623 0.76 -0.1 2,777,209 - Dsui_2623 0.76 +0.0 2,777,245 + Dsui_2623 0.79 +0.3 2,777,247 + Dsui_2623 0.79 +0.2 2,777,331 - Dsui_2623 0.87 +0.2 2,777,379 + +0.4 2,777,419 + -0.1 2,777,425 + +0.5 2,777,484 - -0.6 2,777,600 - -0.0 2,777,632 + +0.2 2,777,645 + -0.1 2,777,715 + +0.2 2,777,715 + +0.1 2,777,719 - -0.0 2,777,723 - +0.2 2,777,725 + -0.0 2,777,737 + -0.1 2,777,742 - +0.2 2,777,763 - +0.4 2,777,763 - +0.1 2,777,809 + -0.1 2,777,809 + +0.3 2,777,809 + -0.2 2,777,809 + +0.1 2,777,809 + +0.2 2,777,809 + +0.2 2,777,812 - +0.3 2,777,817 - +0.4 2,777,817 - -0.5 2,777,817 - +0.5 2,777,819 + +0.2 2,777,819 + -0.6 2,777,819 + +0.1 2,777,856 + +0.1 2,777,857 - -0.2 2,777,864 - +0.3 2,777,864 - +0.3 2,777,891 - +0.2 2,777,893 - -0.5 2,777,911 + -0.1 2,777,911 + +0.1 2,777,911 + +0.0 2,777,911 + +0.2 2,777,911 + +0.2 2,777,911 + +0.3 2,777,911 + +0.1 2,777,911 + +0.2 2,777,911 + +0.0 2,777,916 + -0.3 2,777,919 - +0.1 2,777,954 - +0.3 2,777,965 + -0.6 2,777,965 + -0.2 2,778,008 - +0.1 2,778,009 - +0.2 2,778,009 - +0.1 2,778,011 + -0.4 2,778,011 + +0.5 2,778,011 + -0.2 2,778,071 + -0.5 2,778,079 + -0.1 2,778,079 + -0.3 2,778,079 + +0.2 2,778,086 - +0.1 2,778,087 - +0.4 2,778,092 + +0.2 2,778,130 - +0.4 2,778,174 - -0.3 2,778,179 + +0.0 2,778,184 + -0.2 2,778,184 + +0.8 2,778,184 + +0.1 2,778,192 - +0.9 2,778,192 - -0.1 2,778,192 - +0.0 2,778,192 - -0.1 2,778,192 - +0.0 2,778,219 - +0.1 2,778,242 - Dsui_2625 0.10 +0.2 2,778,247 + Dsui_2625 0.11 -0.2 2,778,257 + Dsui_2625 0.12 +0.4 2,778,265 - Dsui_2625 0.13 -0.1 2,778,267 + Dsui_2625 0.13 +0.1 2,778,282 - Dsui_2625 0.15 +0.2 2,778,329 + Dsui_2625 0.21 -0.5 2,778,334 - Dsui_2625 0.22 +0.2 2,778,342 - Dsui_2625 0.23 +0.2 2,778,343 + Dsui_2625 0.23 -0.7 2,778,351 - Dsui_2625 0.24 -0.0 2,778,353 + Dsui_2625 0.25 +0.2 2,778,356 - Dsui_2625 0.25 +0.2 2,778,359 + Dsui_2625 0.25 +0.1 2,778,378 + Dsui_2625 0.28 +0.3 2,778,378 + Dsui_2625 0.28 +0.5 2,778,378 + Dsui_2625 0.28 -0.0 2,778,386 - Dsui_2625 0.29 +0.0 2,778,386 - Dsui_2625 0.29 +0.9 2,778,386 - Dsui_2625 0.29 +0.2 2,778,406 + Dsui_2625 0.31 +0.4 2,778,406 + Dsui_2625 0.31 +0.2 2,778,414 - Dsui_2625 0.32 +0.4 2,778,414 - Dsui_2625 0.32 +0.2 2,778,414 - Dsui_2625 0.32 +0.1
Or see this region's nucleotide sequence