Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2273 and Dsui_2274 are separated by 201 nucleotides Dsui_2274 and Dsui_2275 overlap by 17 nucleotides Dsui_2275 and Dsui_2276 are separated by 6 nucleotides Dsui_2276 and Dsui_2277 are separated by 210 nucleotides
Dsui_2273: Dsui_2273 - TonB-dependent siderophore receptor, at 2,424,487 to 2,426,691
_2273
Dsui_2274: Dsui_2274 - hypothetical protein, at 2,426,893 to 2,427,222
_2274
Dsui_2275: Dsui_2275 - putative transcriptional regulator, at 2,427,206 to 2,427,433
_2275
Dsui_2276: Dsui_2276 - Protein of unknown function (DUF2975), at 2,427,440 to 2,427,991
_2276
Dsui_2277: Dsui_2277 - Rhs element Vgr protein, at 2,428,202 to 2,431,027
_2277
Position (kb)
2427
2428 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2426.245 kb on + strand at 2426.270 kb on + strand at 2426.342 kb on + strand at 2426.477 kb on - strand at 2426.498 kb on + strand at 2426.545 kb on - strand at 2426.604 kb on - strand at 2426.604 kb on - strand at 2426.679 kb on - strand at 2426.765 kb on - strand at 2426.880 kb on - strand at 2426.893 kb on - strand at 2426.939 kb on - strand, within Dsui_2274 at 2427.068 kb on - strand at 2427.247 kb on - strand, within Dsui_2275 at 2427.250 kb on + strand, within Dsui_2275 at 2427.309 kb on + strand, within Dsui_2275 at 2427.309 kb on + strand, within Dsui_2275 at 2427.309 kb on + strand at 2427.309 kb on + strand at 2427.309 kb on + strand, within Dsui_2275 at 2427.373 kb on + strand at 2427.446 kb on + strand at 2427.449 kb on - strand at 2427.469 kb on + strand at 2427.486 kb on - strand at 2427.793 kb on - strand, within Dsui_2276 at 2427.854 kb on + strand at 2427.878 kb on - strand, within Dsui_2276 at 2427.896 kb on - strand, within Dsui_2276 at 2427.976 kb on + strand at 2427.984 kb on - strand at 2427.997 kb on + strand at 2427.997 kb on + strand at 2428.090 kb on + strand at 2428.090 kb on + strand at 2428.106 kb on - strand at 2428.329 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 2,426,245 + +1.0 2,426,270 + +0.4 2,426,342 + -0.3 2,426,477 - -0.3 2,426,498 + +1.6 2,426,545 - +0.6 2,426,604 - -0.4 2,426,604 - -1.2 2,426,679 - +0.1 2,426,765 - +0.8 2,426,880 - +0.4 2,426,893 - -0.9 2,426,939 - Dsui_2274 0.14 -0.3 2,427,068 - +0.0 2,427,247 - Dsui_2275 0.18 -0.8 2,427,250 + Dsui_2275 0.19 -1.0 2,427,309 + Dsui_2275 0.45 -0.4 2,427,309 + Dsui_2275 0.45 -0.9 2,427,309 + +1.6 2,427,309 + +2.0 2,427,309 + Dsui_2275 0.45 -2.2 2,427,373 + +1.0 2,427,446 + +0.0 2,427,449 - +0.2 2,427,469 + +0.1 2,427,486 - -0.4 2,427,793 - Dsui_2276 0.64 +0.2 2,427,854 + +0.4 2,427,878 - Dsui_2276 0.79 +0.8 2,427,896 - Dsui_2276 0.83 +1.2 2,427,976 + -1.0 2,427,984 - -0.6 2,427,997 + +0.4 2,427,997 + +0.3 2,428,090 + -0.2 2,428,090 + +0.1 2,428,106 - +2.0 2,428,329 + +1.4
Or see this region's nucleotide sequence