Strain Fitness in Dechlorosoma suillum PS around Dsui_1038

Experiment: Anaero. lactate (C), nitrate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1036 and Dsui_1037 are separated by 53 nucleotidesDsui_1037 and Dsui_1038 are separated by 75 nucleotidesDsui_1038 and Dsui_1039 are separated by 13 nucleotides Dsui_1036: Dsui_1036 - ribose-phosphate pyrophosphokinase, at 1,068,170 to 1,069,123 _1036 Dsui_1037: Dsui_1037 - ribosomal protein L25, Ctc-form, at 1,069,177 to 1,069,779 _1037 Dsui_1038: Dsui_1038 - peptidyl-tRNA hydrolase, at 1,069,855 to 1,070,433 _1038 Dsui_1039: Dsui_1039 - GTP-binding protein YchF, at 1,070,447 to 1,071,538 _1039 Position (kb) 1069 1070 1071Strain fitness (log2 ratio) -1 0 1at 1069.671 kb on + strand, within Dsui_1037at 1069.712 kb on - strand, within Dsui_1037at 1070.507 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor
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1,069,671 + Dsui_1037 0.82 +0.7
1,069,712 - Dsui_1037 0.89 -0.1
1,070,507 + +0.4

Or see this region's nucleotide sequence