Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0739 and Dsui_0740 are separated by 2 nucleotides Dsui_0740 and Dsui_0741 are separated by 10 nucleotides
Dsui_0739: Dsui_0739 - Major Facilitator Superfamily transporter, at 736,584 to 738,125
_0739
Dsui_0740: Dsui_0740 - methionine biosynthesis protein MetW, at 738,128 to 738,724
_0740
Dsui_0741: Dsui_0741 - homoserine O-acetyltransferase, at 738,735 to 739,862
_0741
Position (kb) 738
739 Strain fitness (log2 ratio) -1
0
1 at 737.150 kb on - strand, within Dsui_0739 at 737.169 kb on - strand, within Dsui_0739 at 737.217 kb on - strand, within Dsui_0739 at 737.238 kb on + strand, within Dsui_0739 at 737.319 kb on + strand, within Dsui_0739 at 737.327 kb on - strand, within Dsui_0739 at 737.379 kb on - strand, within Dsui_0739 at 737.392 kb on - strand, within Dsui_0739 at 737.420 kb on - strand, within Dsui_0739 at 737.421 kb on + strand at 737.493 kb on + strand, within Dsui_0739 at 737.611 kb on + strand at 737.619 kb on - strand, within Dsui_0739 at 737.623 kb on - strand, within Dsui_0739 at 737.629 kb on - strand, within Dsui_0739 at 737.849 kb on - strand, within Dsui_0739 at 737.891 kb on + strand at 737.901 kb on + strand, within Dsui_0739 at 737.909 kb on - strand, within Dsui_0739 at 737.990 kb on + strand at 738.050 kb on - strand at 738.056 kb on - strand at 738.126 kb on + strand at 738.139 kb on - strand at 738.139 kb on - strand at 738.139 kb on - strand at 738.187 kb on + strand at 738.310 kb on + strand, within Dsui_0740 at 738.347 kb on - strand, within Dsui_0740 at 738.399 kb on - strand, within Dsui_0740 at 738.458 kb on + strand at 738.508 kb on + strand, within Dsui_0740 at 738.508 kb on + strand, within Dsui_0740 at 738.508 kb on + strand, within Dsui_0740 at 738.523 kb on + strand, within Dsui_0740 at 738.559 kb on - strand, within Dsui_0740 at 738.559 kb on - strand, within Dsui_0740 at 738.559 kb on - strand, within Dsui_0740 at 738.559 kb on - strand, within Dsui_0740 at 738.580 kb on + strand, within Dsui_0740 at 738.649 kb on - strand, within Dsui_0740
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 737,150 - Dsui_0739 0.37 -0.3 737,169 - Dsui_0739 0.38 -0.7 737,217 - Dsui_0739 0.41 -0.3 737,238 + Dsui_0739 0.42 +0.1 737,319 + Dsui_0739 0.48 +0.3 737,327 - Dsui_0739 0.48 -0.3 737,379 - Dsui_0739 0.52 +0.4 737,392 - Dsui_0739 0.52 -0.1 737,420 - Dsui_0739 0.54 -0.2 737,421 + +0.1 737,493 + Dsui_0739 0.59 +0.6 737,611 + -0.7 737,619 - Dsui_0739 0.67 -0.3 737,623 - Dsui_0739 0.67 -0.5 737,629 - Dsui_0739 0.68 -0.0 737,849 - Dsui_0739 0.82 -1.2 737,891 + +0.3 737,901 + Dsui_0739 0.85 -0.1 737,909 - Dsui_0739 0.86 -0.9 737,990 + +0.3 738,050 - -0.0 738,056 - +1.1 738,126 + +0.6 738,139 - -0.4 738,139 - -0.2 738,139 - -1.3 738,187 + -0.1 738,310 + Dsui_0740 0.30 -0.8 738,347 - Dsui_0740 0.37 -0.1 738,399 - Dsui_0740 0.45 -1.0 738,458 + -0.7 738,508 + Dsui_0740 0.64 -0.9 738,508 + Dsui_0740 0.64 -1.4 738,508 + Dsui_0740 0.64 -0.3 738,523 + Dsui_0740 0.66 -1.1 738,559 - Dsui_0740 0.72 -0.8 738,559 - Dsui_0740 0.72 -1.0 738,559 - Dsui_0740 0.72 +0.3 738,559 - Dsui_0740 0.72 -1.1 738,580 + Dsui_0740 0.76 -0.7 738,649 - Dsui_0740 0.87 -1.7
Or see this region's nucleotide sequence