Strain Fitness in Dechlorosoma suillum PS around Dsui_0737

Experiment: Anaero. lactate (C), nitrate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0736 and Dsui_0737 are separated by 82 nucleotidesDsui_0737 and Dsui_0738 are separated by 14 nucleotidesDsui_0738 and Dsui_0739 are separated by 15 nucleotides Dsui_0736: Dsui_0736 - FAD/FMN-dependent dehydrogenase, at 732,078 to 735,956 _0736 Dsui_0737: Dsui_0737 - hypothetical protein, at 736,039 to 736,134 _0737 Dsui_0738: Dsui_0738 - secondary thiamine-phosphate synthase enzyme, at 736,149 to 736,568 _0738 Dsui_0739: Dsui_0739 - Major Facilitator Superfamily transporter, at 736,584 to 738,125 _0739 Position (kb) 736 737Strain fitness (log2 ratio) -1 0 1at 736.051 kb on - strand, within Dsui_0737at 736.063 kb on + strand, within Dsui_0737at 736.107 kb on + strand, within Dsui_0737at 736.129 kb on + strandat 736.191 kb on - strand, within Dsui_0738at 736.506 kb on - strand, within Dsui_0738at 736.572 kb on - strandat 736.572 kb on - strandat 736.692 kb on + strandat 736.837 kb on - strand, within Dsui_0739at 736.980 kb on - strand, within Dsui_0739at 737.049 kb on + strand, within Dsui_0739at 737.054 kb on + strand, within Dsui_0739at 737.057 kb on - strand, within Dsui_0739at 737.062 kb on - strand, within Dsui_0739at 737.065 kb on + strand, within Dsui_0739

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor
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736,051 - Dsui_0737 0.12 +0.9
736,063 + Dsui_0737 0.25 +0.1
736,107 + Dsui_0737 0.71 -0.3
736,129 + -0.1
736,191 - Dsui_0738 0.10 -0.4
736,506 - Dsui_0738 0.85 -0.5
736,572 - +0.2
736,572 - +0.3
736,692 + -0.2
736,837 - Dsui_0739 0.16 -0.5
736,980 - Dsui_0739 0.26 +1.0
737,049 + Dsui_0739 0.30 -0.3
737,054 + Dsui_0739 0.30 -0.5
737,057 - Dsui_0739 0.31 +0.2
737,062 - Dsui_0739 0.31 +0.0
737,065 + Dsui_0739 0.31 -0.2

Or see this region's nucleotide sequence